DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and smap1

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:XP_021336343.1 Gene:smap1 / 777731 ZFINID:ZDB-GENE-060920-2 Length:483 Species:Danio rerio


Alignment Length:375 Identity:75/375 - (20%)
Similarity:138/375 - (36%) Gaps:105/375 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 PEQFRMDALQPPVRQKRRKNYE-HI--ELRRPPVDSA------------QLEELNRAAAAAEREE 507
            |||  :.::|.....|.|:.|| |:  ..|||..|.|            :..:.|....|.:..:
Zfish    80 PEQ--IQSVQSMGNTKARQLYEAHLPENFRRPQTDQAVEFFIRDKYERKKYYDKNSVNGAIKSSD 142

  Fly   508 SLL--ISAKNAEAETKTP-KPERSDSWEFYGEDENEEEDRDEEQEGSSSPEPLYANQE------- 562
            :.|  :|:.:::|..|:. :.||        |.:.||:.|:::.:..:.|..|...:|       
Zfish   143 AALPSVSSPSSQAAEKSKLEKER--------EKKKEEKKREKDTDKENKPAVLEKKREDNQIDSR 199

  Fly   563 ATYGKLFEMA---------TAGSSRSNVLTPNQVAEQQQLACITEDSELDACEGAVGGVPLPQAV 618
            .:..|..|.|         |.||:.|.       |.....|.|::|.::   .|.:...||| :.
Zfish   200 ISPKKSAEPAIDLLGLDAPTVGSASSG-------AGTSSAAPISDDLDI---FGPMVSNPLP-SN 253

  Fly   619 IEEFDPLSSKCSTLARSNKSNELLLLEHLLEEDTYGTVKA--EQDDVSMCTSEEEPTTSAATSPK 681
            .......|||.:..|:::.:...:       ....||..|  .|.|:.:.:.....:.:..::.|
Zfish   254 SNSSQVSSSKAAGSAQASSAGGAV-------AGATGTGSAAPAQGDLDLFSETSGNSKAEDSAKK 311

  Fly   682 PQQPQIVHQNARLLSDSMENMLDSDQERAKPYLSRMPESANKAS----GPVDLASASRNRTNWFV 742
            |           |..||:.::..|         |.:|:...:|:    ||..:...::.:.|:  
Zfish   312 P-----------LSKDSILSLYGS---------STVPQQPAQATAMFMGPSQMQFPAQPQGNF-- 354

  Fly   743 PDKASCSDVTPNTSKTTPPIEGDSPP-TYLEAIGGSKDAAGNQENRSTIG 791
                          :..|.:.|..|| |.:.|:.|...|...|.....:|
Zfish   355 --------------QAFPGMGGAMPPTTMMGAVMGQGGAMMGQNTGMMVG 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
smap1XP_021336343.1 ArfGap 18..132 CDD:307528 14/53 (26%)
Med15 <329..>466 CDD:312941 14/78 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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