DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and Arfgap3

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:NP_001344685.1 Gene:Arfgap3 / 66251 MGIID:1913501 Length:525 Species:Mus musculus


Alignment Length:489 Identity:95/489 - (19%)
Similarity:149/489 - (30%) Gaps:184/489 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   447 PAFPPPR------------------LSQQPEQFRMDALQPP-----VRQKRRKNYEHIELRRPPV 488
            |..|||:                  .|.|||    .|...|     ..:|....         |.
Mouse   141 PVSPPPKEEDFFASHASLEVSGAMQASAQPE----SASSTPWGLETTPEKHEGG---------PG 192

  Fly   489 DSAQLEELNRAAAAAEREESLLISAKNAEAE---------------TKTPKPERSDSWEFYGEDE 538
            ....:|.||....||..|.|.:|..|..:|:               |.|...|.        |.:
Mouse   193 QGPSVEGLNTPGKAAPAEVSSIIKKKPNQAKKGLGAKKGSLGAQKLTNTSFTEI--------EKQ 249

  Fly   539 NEEEDRDEEQE----GSSSPEPLYANQEATYGKLFEMATAGSSRSNVLTPNQVAEQQQLACITED 599
            .:..|:.:|||    |:...|.:.::....| |..|::.....|.| |:..:..|.::|.     
Mouse   250 AQAVDKRKEQEDLARGAPKEESIVSSLRLAY-KDLEISRKKDERLN-LSGQKKVEAERLG----- 307

  Fly   600 SELDACEGAVGGVPLPQAVIEEFDPLSSKCSTLARSNKSNELLLLEHLLEEDTYGTVKAEQDDVS 664
            ....:|...:.     .:|..:...:..:..|||:..:.                          
Mouse   308 MGFGSCRSGIS-----HSVTSDMQTIEQESPTLAKPRRK-------------------------- 341

  Fly   665 MCTSEEEPTTSAATSPKPQQPQIVHQNARLLSDSME---NMLDSDQERAKPY----LSRMPESAN 722
               .:|:|..|..:|......|   .::|...|.||   :...|..:.|..|    .||.||.|.
Mouse   342 ---YQEDPEDSYFSSSSKWSEQ---SSSRYFDDPMELRSSSFSSWDDGADSYWKKDSSRDPEPAM 400

  Fly   723 KASGPVDLASASRNRTNWFVPDKASCSDVTPNTSKTTPPIEGDSPPTYLEAIGGSKDAAGNQENR 787
            :::|..|..||.|.                               |.| |.||.:.:|.....|.
Mouse   401 RSTGSSDRPSARRK-------------------------------PEY-EPIGSTDEAQKKFGNV 433

  Fly   788 STIGS--------------RFR----QTINAISNVKLKMDAMKRKASFRGANQRQSDVRVALQMV 834
            ..|.|              |.|    .|.::||:..|..:..|:.|    .|...|:|      :
Mouse   434 KAISSDMYFGIQAQTDFETRARLERLSTSSSISSADLFDEQRKQTA----GNYNLSNV------L 488

  Fly   835 PRPSLSPLLIRYE-------GPLVRFPSGVVEDI 861
            |.   :|.:.:::       |.|..|.:||:..|
Mouse   489 PN---APDMAQFKQGVRSVAGKLSVFANGVMTSI 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
Arfgap3NP_001344685.1 ArfGap 13..116 CDD:214518
CDC27 <134..>292 CDD:312868 35/172 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..206 11/56 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..271 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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