DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP15B and Agap2

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:XP_038935796.1 Gene:Agap2 / 65218 RGDID:628844 Length:1304 Species:Rattus norvegicus


Alignment Length:1220 Identity:228/1220 - (18%)
Similarity:383/1220 - (31%) Gaps:428/1220 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 PVYATP----RPAPRQRL----PPAGEPEDSYPDPDDEVPLRILRAAPQIPPKPLNILLDQRSSI 150
            |..|:|    .|||.:||    .|.|.|......||.:.     ..||....:||          
  Rat    95 PAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSKP-----GGAPSSSRRPL---------- 144

  Fly   151 CSEVSTTSVQTPGKADEDREGSRYASNASLDCSESSHSG----KFKSQSPGYVDAVDSSIPQSDH 211
                    :.:|.....:.||   .:...:..|.|.|.|    :.|...|               
  Rat   145 --------LSSPSWGGPEPEG---RTGGGVPGSSSPHPGTGSRRLKVAPP--------------- 183

  Fly   212 PDPNGHHPQAESSSAEQSSGSQDGDDDNNLLRSLGTTSKLLGEAIGERITFKAKGAKKRLDRNFK 276
                  .|..:......:||::.|.                |:..|.|:::.....|.|: :..|
  Rat   184 ------PPAPKPFKTVTTSGAKAGG----------------GKGAGSRLSWPESEGKPRV-KGSK 225

  Fly   277 SS--------------TEAIS---NIGADAGRSLKHASKRFGSNFSLGRNKDKADIGIGGRPG-- 322
            |:              :.|::   .:||.||...| .|.|.|.:.:|    |.:|:    .||  
  Rat   226 STAGTGASAVAAGGGGSAAVTTSGGVGAGAGARGK-LSPRKGKSKTL----DNSDL----HPGPS 281

  Fly   323 -GSGEMDLDRRQTMPSTEVFNTIQFSSPL-----------------NRNGGLPDLRENDAKLQKE 369
             ||..:.:. ...:|:|.|  |...:.||                 .|.||....|  |.|:.| 
  Rat   282 AGSPPLTVP-AIPVPATSV--TAASTQPLGPAPPITLEPPAPGLKRGREGGRASTR--DRKMLK- 340

  Fly   370 DYLRPDPDQEDDGCYEVPKTQGKPPSYDEALRSRPSPSDSPMSRNLAQEAAQLVQLRNQRQLSSS 434
             ::        .|.:  .|:.|.||.        |.|...|                   |..||
  Rat   341 -FI--------SGIF--TKSTGGPPG--------PGPLPGP-------------------QGLSS 367

  Fly   435 SSNGDESPRLPMPAFPPP-------RLSQQPEQFRMDALQPPVRQKRRK--------NYEHIELR 484
            ||...|.....:.|.|..       .||:...:.|:..| ..||..:..        :|:.:|  
  Rat   368 SSGSRELLGAELRASPKAVVNSQEWTLSRSIPELRLGVL-GDVRSGKSSLIHRFLTGSYQVLE-- 429

  Fly   485 RPPVDSAQLEELNRAAAAAEREESLLISAKNAEAETKTPKPE-RSDSWE------FYGEDENEEE 542
            :|..:..:.|.|      .:.:..|::..:.|.|      |: :...|.      |..|||:.  
  Rat   430 KPESEQYKKEML------VDGQTHLVLIREEAGA------PDAKFSGWADAVIFVFSLEDESS-- 480

  Fly   543 DRDEEQEGSSSPEPLYANQEATYGKLFEMATAGSSRSNVLTPNQVAEQQQLACITEDSELDACEG 607
                           :......:|:|..:  .|..|..:          .||.:.....:.|...
  Rat   481 ---------------FQAVSHLHGQLISL--RGEGRGGL----------ALALVGTQDRISASSP 518

  Fly   608 AVGGVPLPQAVIEEFDPLS--SKCSTLARSNKSNELLLLEHLLEE--DTYGTVKAEQDDVSMCTS 668
            .|.|....:|:..:....|  ..|:|..        |.::.:.:|  ....|::.:|..::.|.|
  Rat   519 RVVGDARARALCTDMKRCSYYETCATYG--------LNVDRVFQEVAQKVVTLRKQQQLLAACKS 575

  Fly   669 -EEEPTTSAATSP-----------------KPQQPQIVHQNARLL-------------------- 695
             ...|:.|||::|                 .|..|.:.|:..|..                    
  Rat   576 LPSSPSHSAASTPVAGQASNGGHTSDYSSSLPSSPNVGHRELRAEAAAVAGLSTPGSLHRAAKRR 640

  Fly   696 ---------SDSMENMLDSDQE-----RAKP-----YLSRMPESANK--ASGPVDLASASRNRTN 739
                     |||.:..|||..|     ||.|     .|.|...|.||  ....|.|:|      |
  Rat   641 TSLFANRRGSDSEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSS------N 699

  Fly   740 WFVPDKASCSDVTPNTS-------KTTPPIEGDSPPTYLEAIGGSKDAAGNQENRSTI------- 790
            .|:....|.:|...:|.       :||..:.|..||..:.|.|.|....|..::.||:       
  Rat   700 GFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASINGLVKDMSTVQMGEGPE 764

  Fly   791 -GSRFRQTINAISNVKLKMDAMKR---KASFRGANQRQSDVRVALQMVP---RPSLSPLLIRYEG 848
             .:.......:.|:::|..|...:   |.....|....:|...:..:.|   .|..||::.:...
  Rat   765 ASTPMPSPSPSPSSLQLPTDQTSKHLLKPDRNLARALSTDCTPSGDLSPLSREPPPSPMVKKQRR 829

  Fly   849 PLVRFPS---------------------GVVEDILKEMQNRKAIL-----RERQFQTFLDQEMKT 887
            ..:..||                     |.:.:|.|..:|.:.::     :...|:....:|...
  Rat   830 KKLSTPSKTEGSAVQAEAKRKMWKLKSFGSLRNIYKAEENFEFLIVSSTGQTWHFEAASFEERDA 894

  Fly   888 PREMIPLDTITTLQCVSNSRV---TDTATHFYCFEITTSQPKNGNGAGDAMSSNP-----NL--L 942
            ..:.|....:.:|||..:|:|   ||:.:.....: .....|..:...|..:.||     ||  |
  Rat   895 WVQAIESQILASLQCCESSKVKLRTDSQSEAVAIQ-AIRNAKGNSTCVDCGAPNPTWASLNLGAL 958

  Fly   943 MTSSSSGNVKQQRVSH-------------------LYGVGKESERGVWMQKILESLT--NSLPVK 986
            :....|| :.:...:|                   |..:|.::...||     ||.|  .:.|.:
  Rat   959 ICIECSG-IHRNLGTHLSRVRSLDLDDWPRELTLVLTAIGNDTANRVW-----ESDTRGRAKPTR 1017

  Fly   987 YTCHYYRAGWCYLKNSITSEWSGTWLVLRKSQRRLIFVS------EANGN-----VEKMDLRKAR 1040
            .:....|..|                 :|....:|:|::      |..|.     ||..|: .|.
  Rat  1018 DSSREERESW-----------------IRAKYEQLLFLAPLGTTEEPLGRQLWAAVEAQDV-AAV 1064

  Fly  1041 CIVLKES-----DESIDNLHVESGPMLMIDCPPYAVYMIMSSARETKIWR 1085
            .::|..:     |.|:::..:.|...|..:.....:..::...||.::||
  Rat  1065 LLLLAHARHGPLDTSVEDPQLRSPLHLAAELAHVVITQLLLWVRERRVWR 1114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
Agap2XP_038935796.1 PRK07764 <37..174 CDD:236090 24/104 (23%)
Centaurin_gamma 401..560 CDD:133303 33/210 (16%)
PH_AGAP 668..908 CDD:241281 46/245 (19%)
ArfGap_AGAP 926..1033 CDD:350065 21/130 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.