DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and arap2

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:XP_009301838.1 Gene:arap2 / 559690 ZFINID:ZDB-GENE-130530-663 Length:1612 Species:Danio rerio


Alignment Length:1596 Identity:340/1596 - (21%)
Similarity:551/1596 - (34%) Gaps:429/1596 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 IPPKPLNILLDQRSSICSEVSTTSVQTPGK------------ADEDREGSRY----ASNA----- 178
            ||......:|....::..||..:||:.|.|            .|:.:|.|.|    |.|.     
Zfish    48 IPTGHRRRILSSLETLMMEVEGSSVKVPVKRKPIPRPRQVLSKDKQKEASTYQHAQAGNVQMTRQ 112

  Fly   179 SLDCSESSHSGKFK--SQSPGYVDAVDSSIPQSDHPDPNGHHPQAESSSAE---QSSGSQDGDDD 238
            :|....:::||...  ||:...:....:|...|...| ||.....|:.:.:   ..||....|. 
Zfish   113 TLPARTTAYSGTMNVGSQTLPRIKCHAASSGSSSTSD-NGSSESLENFTEDHVTNKSGGLPADG- 175

  Fly   239 NNLLRSLGTTSKLLGEAIGERITFKAKGAKKRLDRNFKSSTEAISNI-----------GADAGRS 292
                .:||...:::...|.|...|....::.|..|:||.....:..|           ......:
Zfish   176 ----AALGFQGEMVENEIYEECLFATVPSEPRSTRSFKLRHRPVPEIPEHPFIPSYDRNVAGNNN 236

  Fly   293 LKHASKRFG-------SNFSLGRNKDKADIGIGGRPGG------SGEMDLDRRQTMPSTEVFNTI 344
            ..|.::..|       ...||.|......      |.|      |.|..||..:...|.:|..|:
Zfish   237 TDHLTRSEGLILPPSHQKASLERTLSPIS------PYGELFLFNSAENVLDLSKDEMSNQVKETL 295

  Fly   345 ----------QFSSPLNRNGGLPDLR----ENDAKLQKEDYLRPDPDQEDDGCYEVPKTQGKPPS 395
                      |....::.| ...||.    ::|..:.:.||......|....|.::......||:
Zfish   296 EQQKLRHKQTQAKEKVHYN-NKQDLSKQHIDDDKNVDENDYDDYSTVQASSFCQQITNEHPTPPT 359

  Fly   396 YDEALRSRPSPSDSPMSRNLAQEAAQLVQLRNQRQLSSSSSNG-DESPRLPMPAFPP-PRLSQQP 458
                |.|...||              .|..::|..::...|.. |:.|.|..|:.|| ..||..|
Zfish   360 ----LLSSTGPS--------------AVSAQSQADVNVIYSLAHDDQPGLLKPSVPPRTDLSISP 406

  Fly   459 ------------EQFRMDALQPP---VRQKRRKNYEHIELRRPPVDSAQLEELNRAAAAAERE-- 506
                        :...:|.|.|.   |.|:|               ..:||..|.....:|:|  
Zfish   407 YACFYGICKTATKAGWLDKLSPQGNCVFQRR---------------WVKLEGGNLTYYNSEKEMY 456

  Fly   507 -ESLL----ISAKNAEAETKTPKPERSDSWEFYGEDENEEEDRDEEQEGSSSPEPLYANQEATYG 566
             :.|:    :....|..|.|........::.|..|.|.:.:|..|..:.:.|.:...::|     
Zfish   457 SKGLIPLSAVKQIRALGENKFEVVTTLRTFVFRAEKEGDRQDWLEVLQAAVSSQSSVSHQ----- 516

  Fly   567 KLFEMATAGSSRSNVLTPNQVAEQQQL--------------ACITEDSELDACEG-AVGGVPLPQ 616
                      .|.|....:...|.:.|              .|.| |.:.:|  | |:..|.|..
Zfish   517 ----------PRKNNTNKSGYVELRGLKGRVYLSLMGTCFRLCKT-DQDFNA--GLAIAVVDLTA 568

  Fly   617 AVIEEFD--------PLSSKCSTLARSNKSNELLLLEHLLEEDTYGTVKAEQDDV--SMCTSE-- 669
            |.:::|:        |..|.|.|:..          ||  |.|.:  ::|.|:.:  ::|..|  
Zfish   569 ACVKQFERKGLEITTPFKSFCFTVES----------EH--ERDEW--IEAVQESIVETLCNYEVL 619

  Fly   670 -------EEPTTSAATSPKPQQPQI-----VHQNA----RLLSDSMENM----LDSD---QERAK 711
                   .....:...:|:|:...|     :.:|.    |.|...:..:    |||.   .|..:
Zfish   620 EKVWFNKSNRKCADCQAPEPEWASINLCVVICKNCAGQHRFLGPGISKVRSMKLDSSIWTNELIE 684

  Fly   712 PYLSRMPESANKASGPVDLASASRNRTNWFVPDKASCSDVTPNTSKTTPPIEGDSPPTYLEAIGG 776
            .:|    |..||.|..:.:|:        ..|:...|..                         .
Zfish   685 LFL----EVGNKNSNSLWVAN--------LPPEDELCKQ-------------------------S 712

  Fly   777 SKDAAGNQENRSTIGSRFRQTINAISNVK----------LKMDAMKRKA-SFRGANQRQSDVRVA 830
            |.:...:...|.....::::.:|.::..:          :..|.::..| .|.||     ||..|
Zfish   713 STEQRASFIRRKYKKRKYKKVLNGLNTQEELNKALCAAVVLPDVLQTMALVFSGA-----DVMCA 772

  Fly   831 LQMVPRPSLS-PLLIR------------YEGPLVRFP-------SGVVEDILKEMQN-------- 867
               ...|.|| |.|:.            |...|..||       |....|....|..        
Zfish   773 ---TGDPELSTPYLLAQKAGQRLQMEFLYHNKLSDFPKLEAICDSSFAADAPSFMDGFLYCSANA 834

  Fly   868 --------------RKAILRERQFQTFLDQE-MKTPREMIPLDTITTLQCVSNSRVTDTATHFYC 917
                          |:....|..|.::.|.| :.||...:.:..:.:|...:|..:|:|...| .
Zfish   835 GKATLDRKGKPDMVRRWCTLEGGFLSYYDNEKIATPIGRVDIGDVVSLAINNNQTITETGPVF-T 898

  Fly   918 FEITTSQPKNGNGAGDAMSSNPNLLMTSSSSGNVKQQRVSHLYGVGKESERGVWMQKILES---- 978
            ||:                             .::.|||. ::||........|...|.:|    
Zfish   899 FEL-----------------------------YLRSQRVL-VFGVETSDAHQDWTNAIAKSFVPP 933

  Fly   979 -----------LTNSLPVK--YTCHYYRAGWCYLKNSITSEWSGTWLVLRKSQRRLIFVS----E 1026
                       |...|..|  :..:::|.||..|..|                 .|.|.|    |
Zfish   934 RADALLRQDSELIGRLYYKEGHDLYHWRIGWFTLVGS-----------------ELYFCSGDEDE 981

  Fly  1027 ANGNVEKMDLRKARCIVLKESDESID-NLHVESGPMLMIDCPPYAVYMIMSSARETKIWRHIIRE 1090
            ..|.::...|::.......|.||:|. .|.||||..|.|.|         .:.::..:|...|:.
Zfish   982 EEGVLQLKRLQELTVSTHIEGDENIQVLLMVESGRTLYIHC---------ITKQDFALWHSAIQL 1037

  Fly  1091 VAHNNGFSLGDQQLTRYDVPVIVDKCINFVYIHGSMSEGIYRKSGSENSMHKLMSAFRADAFNVE 1155
            .|..:|.:|.:||:.:.|||:|||.||.||..:|...||||:|.|....:..|:..|..||..|:
Zfish  1038 AAGTDGMALSNQQMNKNDVPIIVDSCIAFVTQYGLCYEGIYQKKGDPGRVAHLIQEFTKDARVVK 1102

  Fly  1156 ITRNEYNEHDVANVLKRFMRDLPERLLGKLTDSFVFVTELAVASEKIPI--YRELLARLSAIERE 1218
            :...|....||.:.||.|:....:.||.|....| :::.|....||:.:  |...:..|..:.|.
Zfish  1103 LRVQEQRLEDVTDTLKSFLSHSEDALLAKELYPF-WISALDEQDEKVRVQKYSSYIQSLPKVNRS 1166

  Fly  1219 TLRRIVGHLVFISSQQAKNKMSVQNLTMIWGPTLLAKKSDELIYSQKEADVLSDLVVLYKNLFPC 1283
            ||..::.||..|......|:||.|.|..::...|...:.    ::.:|..|:.||:..|..||..
Zfish  1167 TLGALLQHLYRIQRCSHINQMSSQRLACVFSSCLFQTEG----HTAQETQVVEDLINNYIQLFSV 1227

  Fly  1284 SADEIKREQAMLACLQKYYAAAETLKDAV-KQSGDIKIWISLNPNPENKTEEKTQVNATISPTKT 1347
            :.:::::       ::|..:.....||.. ..:||:.....|    |.|..||..: ..|||...
Zfish  1228 NDEQVRQ-------MEKENSFITRWKDTTFSPAGDLIFEAYL----EKKEPEKCCL-IKISPNMR 1280

  Fly  1348 AYELC---REYSAKMQLPTHQL-TLYEVILNDSLERPLHHDTKVFDVILNWSYWPEEDRKHNYLV 1408
            :.||.   .|... |::....| |.:|||.|..:|||||:..||.:.:|.|.  ..||....:|:
Zfish  1281 SDELAVSTLEMKG-MEVKAQDLWTTFEVIENGEMERPLHYKEKVLEQVLEWR--SLEDPSSAFLL 1342

  Fly  1409 VRPVEMLREIQRAVKNLATVTPGKELRFADSRTK-----TFKTLQCELRDGKIVVSKKDKNDKTT 1468
            ::.....:........|.....|:.|:|.|..:|     .|:.....|:|.|:::.|..|:.|..
Zfish  1343 IKKYSGCKMTDSNSDKLKDFIKGEHLKFKDGSSKLLLGNKFQDRYLVLQDKKLLLYKDIKSTKPE 1407

  Fly  1469 IVREIFLQSSTAYLGCERKRDFPWSWAIT-FVERTQ 1503
              ||..|::...|.|..||.....||..| :.|:.|
Zfish  1408 --REAPLKAVKCYFGLRRKLKPTSSWGFTVYTEKQQ 1441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850 57/183 (31%)
arap2XP_009301838.1 SAM_superfamily 2..62 CDD:326639 3/13 (23%)
PH-like 418..503 CDD:327399 20/99 (20%)
PH2_ARAP 517..606 CDD:270074 23/105 (22%)
ArfGap 617..721 CDD:307528 20/140 (14%)
PH-like 821..930 CDD:327399 22/139 (16%)
PH-like 944..1038 CDD:327399 28/119 (24%)
RhoGAP 1042..1221 CDD:295372 57/183 (31%)
TGS 1261..1345 CDD:330245 30/91 (33%)
PH-like 1359..1470 CDD:327399 25/85 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001278
OrthoInspector 1 1.000 - - otm25182
orthoMCL 1 0.900 - - OOG6_104434
Panther 1 1.100 - - O PTHR45899
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.910

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