DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and arfgap3

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:NP_991160.1 Gene:arfgap3 / 402889 ZFINID:ZDB-GENE-040426-1 Length:498 Species:Danio rerio


Alignment Length:464 Identity:100/464 - (21%)
Similarity:172/464 - (37%) Gaps:116/464 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 GSRYASNASLD---CSESS-HSGKFKSQSPG-YVDAVDSSIPQSDHPDPNGHHPQAESSSAEQSS 230
            |...::||...   ||.|| .:.|:.|::.. |.|.:.:...|:..  .:|.....::.:....|
Zfish    82 GGNASANAFFSQHGCSSSSAANAKYSSRAAALYRDKIRALANQATR--QHGTELWLDAQAPLSPS 144

  Fly   231 GSQDGDDDNNLLRSLGTTSKLLGEAIGERITFKAKGAKKRL-DRNFKSSTEAISNIGADAGRSLK 294
            ...|..:|   ..:..|.|     |:.:.:......::||: |.|        :|..::||.|::
Zfish   145 SPLDKQED---FFTQHTQS-----ALPDTVQLNISQSQKRVQDNN--------NNAKSEAGPSVE 193

  Fly   295 HAS----KRFGSNFSLGRNKDKA---DIGIGGRPGGSGEMDLDRRQTMPSTEVFNTIQFSSPLNR 352
            ..|    :......||.:.|..|   ..| |||..|.|...:       |::.| |:|       
Zfish   194 QLSVSPVQSAAEPLSLLKKKPAAVRKSAG-GGRRAGLGAQKV-------SSQSF-TLQ------- 242

  Fly   353 NGGLPDLRENDAKLQKEDYL--RPDPDQEDDGCYEVPKTQGKPPSYDEALRSRPSPSDSPMSRNL 415
                      ..:.|.||.|  :......|...:.|.:.|       :|:..:.|..||..||..
Zfish   243 ----------QRRAQAEDRLTEQRTSTAPDHSVWSVSRVQ-------QAVDVQRSAQDSSSSRMK 290

  Fly   416 AQEAAQL-VQLRNQRQLSSSSSNGDES-PRLPMPAFPPPRLSQQPEQ-----FRMDALQ------ 467
            .|:..:| :.|..:..||.|.:...:: .:...|:....|:.::.||     |...||.      
Zfish   291 QQQEERLGMGLSGRSGLSHSVTEDMQTIIQQDCPSLSSRRVYEEDEQQEDTHFCSRALDEGRGSS 355

  Fly   468 -------PPVRQKRRKNYEHIELRRPPVDSAQLEELNRAAAAAEREESLLISAKNAEAETKTPKP 525
                   ...:|.|.|          |.....:|:.:||:|:.:..:|:...|:....:.|....
Zfish   356 DLFFSQWSSEKQSRMK----------PESDYCVEDEHRASASRKEPQSVCDDAQRKFGDAKAISS 410

  Fly   526 ERSDSWEFYG-EDENEEEDRDEEQEGSSSPEPLYANQEATYGKLF--EMATAGSSR---SNVLTP 584
            :.     |:| :|.:|.|.|...:..|||       ...:...||  :...||||.   |:||  
Zfish   411 DM-----FFGTQDRSEYEVRARLENFSSS-------SAISSADLFDEQKKAAGSSSYRLSSVL-- 461

  Fly   585 NQVAEQQQL 593
            :.|.:..||
Zfish   462 SSVPDMTQL 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
arfgap3NP_991160.1 ArfGap 10..123 CDD:279720 11/40 (28%)
PLN03114 11..486 CDD:178661 100/464 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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