DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and Agfg1

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:NP_001129068.1 Gene:Agfg1 / 363266 RGDID:1560041 Length:561 Species:Rattus norvegicus


Alignment Length:471 Identity:98/471 - (20%)
Similarity:134/471 - (28%) Gaps:154/471 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 KLILQENNSDSQQPIYGPDANENVQEPVYA------------TPRPAPRQRL----PPA-----G 111
            |..|||.....:.  |.|.....|...|:|            ||...|.:.|    .||     |
  Rat   114 KEFLQEKYEKKRW--YVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGESAPALHLNKG 176

  Fly   112 EPEDSYPDPDDEVPLRILRAAPQIPPKPLNILLDQRSSICSEVSTTSVQTPGKADEDREGSRYAS 176
            .|..|        |:.......|...|..::|.|..|.|.:..:..|..|...|:.....|..|.
  Rat   177 TPTQS--------PVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQ 233

  Fly   177 N------ASLDC----SESSHSGKF--KSQSP-------GYVDAVDSSIPQSDHPDPNGHHPQAE 222
            |      |:.|.    |.||:.|.|  .|.||       |...:|:::....|: .|........
  Rat   234 NSANAEFANFDAFGQSSGSSNFGGFPTASHSPFQPQTTGGSAGSVNANFAHFDN-FPKSSSADFG 297

  Fly   223 SSSAEQS---------------------------------SGSQDGDDDNNLLRSLGTTSKL-LG 253
            |.|..||                                 |..|.||..:    ..|||.|. :|
  Rat   298 SFSTSQSHQTASTVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGS----GFGTTGKAPVG 358

  Fly   254 EAIGERITFKAKGAK----KRLDRNFKSSTEAISNIGADAGRSLKHASKRFGSNFSLGRNKDKAD 314
            ..:.......|...|    ..||..|.|:  |.||   :|..|..:||........:|.:.....
  Rat   359 SVVSVPSHSSASSDKYAALAELDSVFSSA--ATSN---NAYTSTSNASSSVFGTVPVGASPQTQP 418

  Fly   315 IGIGGRPGGSGEMDLDRRQTMPSTEVFNTIQFSSPLNRNGGLPDLRENDAKLQKEDYLRPDPDQE 379
            ...|..|.|:          .|||..|  :..:.|...:...|                      
  Rat   419 ASSGPAPFGA----------TPSTNPF--VAATGPSAASSTNP---------------------- 449

  Fly   380 DDGCYEVPKTQGKPPSYDEALRSRPSPSDSPMSRNLAQEAAQLVQLRNQRQLSSSSSNGDESPRL 444
                ::.........::..|..|.|:...:|.                |..|.:|.|...:.|..
  Rat   450 ----FQTNARGATAATFGTASMSMPAGFGTPA----------------QYSLPTSFSGSFQQPPF 494

  Fly   445 P-MPAFP-PPRLSQQP 458
            | ..||| ....||||
  Rat   495 PAQAAFPQQTAFSQQP 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
Agfg1NP_001129068.1 COG5347 8..309 CDD:227651 49/205 (24%)
ArfGap 14..135 CDD:214518 6/22 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..193 5/29 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 409..451 10/79 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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