DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and Agap3

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:XP_006236000.1 Gene:Agap3 / 362300 RGDID:1310751 Length:1093 Species:Rattus norvegicus


Alignment Length:733 Identity:152/733 - (20%)
Similarity:221/733 - (30%) Gaps:326/733 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PNSPSNNINHNNIKKLNINAENLHGNCAEKKLPSSGQNKLILQENNSDSQQPIYGPDANENVQEP 94
            |||||    |:.:...:|.|.:::                  |..|.       |..|..:....
  Rat   486 PNSPS----HSAVSAASIPAVHIN------------------QATNG-------GGSAFSDYSSS 521

  Fly    95 VYATPRPAPRQRLPPAGEPEDSYPDPDDEVPLRILRAAPQIPPKPLNILLDQRSSICSEVSTTSV 159
            |.:||..:.|:                    |||...|....|.|:.....:||:|.        
  Rat   522 VPSTPSISQRE--------------------LRIETIAASSTPTPIRKQSKRRSNIF-------- 558

  Fly   160 QTPGK-ADEDREGSRYASNASLDCSES------------SHSGKF--KSQSPGYVDAVDSSIPQS 209
             |..| ||.|||  :.|:...:|...|            ..|||.  |.....||...|      
  Rat   559 -TSRKGADPDRE--KKAAECKVDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCD------ 614

  Fly   210 DHPDPNG---HHPQAESSSAEQSSGSQDGDDDNNLLRSLGTTSKLLGEAIGERITFKAKGAKKRL 271
                 ||   :||......  |:...::.|    |||   ||.|:.|               |||
  Rat   615 -----NGLLTYHPSLHDYM--QNIHGKEID----LLR---TTVKVPG---------------KRL 650

  Fly   272 DRNFKSSTEAISNIGADAGRSLKHASKRFG---------SNFSLGRNKDKADIGIGGRPGGSGEM 327
            .|...|:....|..||: |.:|:.::.:.|         |:.||...:.......|.||.|    
  Rat   651 PRATPSTAPGTSPRGAN-GLALERSNTQLGGTTGRPHSASSASLHSERPHRSAWAGSRPEG---- 710

  Fly   328 DLDRRQTMPSTEVFNTIQFSSPLNRNGGLPDLRENDAKLQKEDYLRPDPDQEDDGCYEVPKTQGK 392
             |.:|    |..:.:|.|:|:.    ..||      |.:|:                        
  Rat   711 -LHQR----SCSISSTDQWSAA----AALP------ASVQR------------------------ 736

  Fly   393 PPSYDEALRSRPSPSDSPMSRNLAQEAAQLVQLRNQRQLSSSSSNGDESPRLPMPAFPPPRLSQQ 457
                         |:..|         |:|        |||       ||:|..|  |.||.:::
  Rat   737 -------------PASGP---------AEL--------LSS-------SPKLEPP--PSPRSNRK 762

  Fly   458 PEQFRMDALQPPVRQKRRKNYEHIELRRPPVDSAQLEELNRAAAAAEREESLLISAKNAEAETKT 522
                         :|:|:|:     ...|..|...       :||.|.|||......:...:|  
  Rat   763 -------------KQRRKKS-----TGTPRPDGPN-------SAAEETEESFEFVVVSLTGQT-- 800

  Fly   523 PKPERSDSWEFYGEDENEEE-------------------DRDEEQEGSSS--------------- 553
                    |.|......|.|                   .:|:.:.|:.|               
  Rat   801 --------WHFEASTAEERELWVQSVQAQILASLQGCRSAKDKTRLGNQSTALAVQTVRTARGNS 857

  Fly   554 -------PEPLYANQEATYGKLFEMATAGSSR------SNVLT-------PNQVAEQQQLACITE 598
                   |.|.:|:  ...|.|..:..:|..|      |.|.:       |..:|....:.....
  Rat   858 FCVDCEAPNPDWAS--LNLGALMCIECSGIHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALA 920

  Fly   599 DSELDACEGAVGGV--PLPQAVIEEFD--------------PLSSK----CSTLARSNKSNELLL 643
            :|   ..|||:.|.  |.|:|..||.:              ||.|.    ...|.|:...::|.|
  Rat   921 NS---VWEGALDGYSKPGPEACREEKERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRL 982

  Fly   644 LEHLL-----EE--DTYG 654
            |..||     ||  :|||
  Rat   983 LVMLLAHGSKEEVNETYG 1000

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
Agap3XP_006236000.1 small_GTPase 309..474 CDD:197466
Centaurin_gamma 311..468 CDD:133303
PH_AGAP 584..827 CDD:241281 78/395 (20%)
PH 587..>648 CDD:278594 20/95 (21%)
ArfGap 855..960 CDD:279720 21/109 (19%)
Ank_2 971..1061 CDD:289560 12/30 (40%)
ANK 971..>1060 CDD:238125 12/30 (40%)
ANK repeat 971..1001 CDD:293786 12/30 (40%)
ANK repeat 1003..1034 CDD:293786
ANK repeat 1036..1061 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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