DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and Arap3

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:XP_038953330.1 Gene:Arap3 / 361314 RGDID:1304938 Length:1538 Species:Rattus norvegicus


Alignment Length:1453 Identity:313/1453 - (21%)
Similarity:516/1453 - (35%) Gaps:419/1453 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 ADAGRSLKHASKRFGSNFSLGRNKDKADIGI---GGR-------PGGSGEMDLDRR--QTM-PST 338
            ||..|  :|.....|:...|| :::...:||   |.|       ..||.|..||.:  .|| |:.
  Rat    22 ADTFR--RHGLATAGAAQRLG-HEELRHLGISATGHRKRILRLLQSGSAEGFLDSQLDSTMEPTP 83

  Fly   339 EVFNTIQFSSPLNRNGGLPDLRENDAKLQKED----YLRPDPDQEDDGCYEVPKTQGKPPSYDEA 399
            ......|.|.|:.:...:..| .|.|..||..    :..|:..:..: |     ||..||..   
  Rat    84 SPAPDAQPSKPVPKPRTVFGL-SNPANAQKPGLNPIFWNPEVSRNSE-C-----TQRSPPVL--- 138

  Fly   400 LRSRPSPSDSPMSRNLAQEAAQLV----QLRNQRQLSSSSSNGDESPRLPMPAFPPPRLSQQPEQ 460
                ||.|:.|.:.|..:.....:    .||.:.|.:...:.......:|.|||.|...:..   
  Rat   139 ----PSSSEQPSALNTMEMMPNAIYFGLDLRGRAQAAQDLTPDSSQATVPTPAFRPTTGTVH--- 196

  Fly   461 FRMD------ALQP------PVRQKRR----KNYEHIELRRPPVDSAQLEELNRAAAAAERE--- 506
             .||      .:||      |.|:..|    :..||         |.|.:|....|..|..|   
  Rat   197 -IMDPGCLYYGVQPVGVPGVPDRRDGRGVCQERAEH---------SRQDQETREDAGYASLELPG 251

  Fly   507 ESLL-ISAKNAEAETKTPKPERSDSWEFYGEDENEEEDRDEEQEGSSSPEPLYANQEATYGKLFE 570
            :|:| :..::||.......|..|.|         ...||         |.||.:      |.|.:
  Rat   252 DSILSLPTQDAETSDDLISPYASFS---------STADR---------PVPLLS------GWLDK 292

  Fly   571 MATAGSSRSNVLTPNQVAEQQQLACITEDSELDACEGAVGGVPLPQAVIEEFDPLSSKCSTLARS 635
            ::..|    |.:...:..:....:.:...|:.|         |.|:.||    ||::  ..:.||
  Rat   293 LSPQG----NYVFQRRFVQFNGRSLMYFGSDKD---------PFPKGVI----PLTA--IEMTRS 338

  Fly   636 NKSNELLLL--EHLLEEDTYGTVKAEQDDVSMCTS-----EEEPTTSAATSPKPQQPQIVHQNAR 693
            :|.|:..::  :.:.   .:.|....|.|: .|::     :|:........|.|.:|        
  Rat   339 SKDNKFQVITGQRVF---VFRTESEAQRDI-WCSTLQSCLKEQRLLGHPRPPHPPRP-------- 391

  Fly   694 LLSDSMENMLDSDQERAKPYLSRMP--------ESA------------------NKASGPVDL-- 730
                ....||:....:||.:.:.:|        |.|                  ...|...||  
  Rat   392 ----LRTGMLELRGHKAKVFAALIPGELALYKSEQAFSLGIGICFIELQGCSVRETKSRSFDLLT 452

  Fly   731 --------ASASRNRTNWFV----------------------PDKASCSDVTPNTSKTTPPIEGD 765
                    |.:...|.:|.|                      |....|:|...            
  Rat   453 PHRCFSFTAESGGARQSWAVALQEAVTETLSDYEVAEKVWSNPANRHCADCRA------------ 505

  Fly   766 SPPTYLEAIGG---SKDAAGNQENRSTIGSRFRQTINAISNVK-LKMDA---------------- 810
            |.|.:.....|   .|..||...   .:||       .||.|: ||:|.                
  Rat   506 SRPDWAAVNLGVVICKQCAGQHR---ALGS-------GISKVQSLKLDTSVWTNEIVQLFIVLGN 560

  Fly   811 -----------------------------MKRK---ASFRGANQRQSDVRVALQMVPRPSLSPLL 843
                                         :.||   ..:|..:.|..|....||.:....:.|.|
  Rat   561 DRANCFWAGALPPGEGLHPDAAPGPRGEFISRKYKLGLYRKPHPRHPDHSQLLQALCAAMVGPNL 625

  Fly   844 IR----------YEGPLVRFPSGVVEDILKEMQNRKA------ILRERQFQTFL-----DQEMKT 887
            ::          .||.....||.:...:|..:.:..:      ::....::.||     ..:...
  Rat   626 LKNMTQLLCVEASEGEEPLSPSALNGSLLSLLPSDSSPGVYNEVVVPATYRGFLYCGPISNKAGA 690

  Fly   888 PREMIPL----DTITTLQCVSNSRVTDTATHFYCFEITTSQPKN-----------GNGAGDAMSS 937
            |    ||    |....|.||..:.:...|:......::..||::           .:|..|....
  Rat   691 P----PLRRGRDAPPRLWCVLGAALEMFASESSSEPLSLLQPQDVVCLGISPPPADSGDLDRFPF 751

  Fly   938 NPNLLMTSSSSGNVKQQRVSHLYGVGKESER------GVWMQKILESLTNSLPVKYTCH------ 990
            :..|::|..        |:.|....|.:|..      |.|...:            :||      
  Rat   752 SFELILTGG--------RIQHFATDGADSLEAWISAVGKWFSPL------------SCHQLLGPG 796

  Fly   991 YYRAGWCYLKN-SITSEWSGTWL----VLRKSQRRLIFVSEANG-----NVEKMDLRKARCI-VL 1044
            ..|.|..:|:: |......|.||    :||...   :|:..|.|     ..:.:.||:.:.| |:
  Rat   797 LLRMGRLWLRSPSHAGLAPGLWLSGFGLLRGDH---LFLCPAPGPGPPAPEDMVHLRRLQEISVV 858

  Fly  1045 KESDESIDNLH---VESGPMLMIDCPPYAVYMIMSSARETKIWRHIIREVAHNNGFSLGDQQLTR 1106
            ..:|......|   ||:|..|         |:......:...|...|...|...|..|.:||::|
  Rat   859 SAADTPDKKEHLVLVETGRTL---------YLQGEGRLDFAAWNTAIGGAAGGGGTGLQEQQMSR 914

  Fly  1107 YDVPVIVDKCINFVYIHGSMSEGIYRKSGSENSMHKLMSAFRADAFNVEITRNEYNEHDVANVLK 1171
            .|:|:|||.||:||..||...||:|||.|:.....:|::.||.||.:|::...|:...||.:.||
  Rat   915 GDIPIIVDACISFVTQHGLRLEGVYRKGGARARSLRLLAEFRRDARSVKLRPREHFVEDVTDTLK 979

  Fly  1172 RFMRDLPE-----RLLGKLTDSFVFVTELAVASEKIPIYRELLARLSAIERETLRRIVGHLVFIS 1231
            ||.|:|.:     |||.:..::    .||...::::..|:|:::.|..:.|.||..::|||..:.
  Rat   980 RFFRELDDPVTSARLLPRWREA----AELPQKNQRLEKYKEVISCLPRVNRRTLATLIGHLYRVQ 1040

  Fly  1232 SQQAKNKMSVQNLTMIWGPTLLAKKSDELIYSQKEADVLSDLVVLYKNLFPCSAD---EIKREQA 1293
            ...|.|:|..:||.:::.|::.....    ..:.|..||.:|:..|.::|...:|   :|..|.:
  Rat  1041 KCAALNQMCTRNLALLFAPSVFQTDG----RGEHEVRVLQELIDGYISVFDIDSDQAAQIDLEVS 1101

  Fly  1294 MLACLQKYYAAAETLKDA-VKQSGDIKIWISLNPN-PENKTEEKTQVNATISPTKTAYELCREYS 1356
            ::.          |.||. :.|:||:.:.:.:... |:|      .|...:|||.||.||..:. 
  Rat  1102 LIT----------TWKDVQLSQAGDLIMEVYIEQQLPDN------CVTLKVSPTLTAEELTNQV- 1149

  Fly  1357 AKMQ---LPTHQLTLYEVILNDSLERPLHHDTKVFDVILNWSYWPEEDRKHNYLVVRPVEMLRE- 1417
            .:|:   ..|.....:|::.:..||||||...||.:..|.|...||.....  |::|.|.|... 
  Rat  1150 LEMRGAASGTDLWVTFEILDHGELERPLHPKEKVLEQALQWCQLPEPCSAS--LLLRKVSMAHAG 1212

  Fly  1418 -----IQRAVKNLATVTPGKE-LRFADSRTKTFKTLQCELRDGKIVVSKKDKNDKTTIVREIFLQ 1476
                 ::|....:..:...:| .|...||   |:.....:|...:::.|:.|:.|..  ||..|:
  Rat  1213 CLFTGVRRESPRVGLLRCREEPPRLLGSR---FQERFFLVRGRCLLLLKEKKSSKPE--REWSLE 1272

  Fly  1477 SSTAYLGCERKRDFPWSWAITFV 1499
            .:..|||..:|...|..|..|.:
  Rat  1273 GAKVYLGIRKKLKPPTLWGFTLI 1295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850 61/186 (33%)
Arap3XP_038953330.1 SAM_Arap1,2,3 4..66 CDD:188889 11/46 (24%)
PH1_ARAP 285..377 CDD:270073 21/120 (18%)
PH2_ARAP 392..475 CDD:270074 14/82 (17%)
ArfGap_ARAP3 485..600 CDD:350089 19/136 (14%)
PH-like 672..784 CDD:418428 21/123 (17%)
PH-like 799..892 CDD:418428 23/104 (22%)
RhoGAP_ARAP 907..1082 CDD:239850 60/182 (33%)
Ubiquitin_like_fold 1114..1211 CDD:421700 31/105 (30%)
PH5_ARAP 1211..1327 CDD:270079 20/90 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 104 1.000 Domainoid score I6548
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001278
OrthoInspector 1 1.000 - - otm46276
orthoMCL 1 0.900 - - OOG6_104434
Panther 1 1.100 - - O PTHR45899
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.000

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