DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and drongo

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:NP_001162848.1 Gene:drongo / 33263 FlyBaseID:FBgn0020304 Length:673 Species:Drosophila melanogaster


Alignment Length:697 Identity:127/697 - (18%)
Similarity:218/697 - (31%) Gaps:237/697 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   428 QRQLSSSSSNGDE-SPRLPMPAFPPPRLSQQPEQ--FRMDA-------LQPPVRQKRRKNYEHIE 482
            |.::....|:|:| ..:..:..:.|.|...|.||  ..||.       |:|....|...|..:::
  Fly    76 QDEIDFLRSHGNELCAKTWLGLWDPKRAVHQQEQRELMMDKYERKRYYLEPASPLKSLANAVNLK 140

  Fly   483 LRRPPVDSAQLEELNRAAA------AAERE-----ESLLISAKNAEAETKTPKPERSDSWEFYGE 536
            ...|..:..|....|..|:      ||:|.     :.:..|:.|:..:|.:     |.|...|..
  Fly   141 SSAPATNHTQNGHQNGYASIHLTPPAAQRTSANGLQKVANSSSNSSGKTSS-----SISRPHYNH 200

  Fly   537 DENEEEDRDEEQEGSSSPEPLYANQEA--TYGKLFEMATAGSSRSNVLTPNQVAEQQQLACITED 599
            ..|.:.:                |.:|  ..|.|..:.:|||:.:..|                 
  Fly   201 QNNSQNN----------------NHDAFGLGGGLSSLNSAGSTSTGAL----------------- 232

  Fly   600 SELDACEGAVGGVPLPQAVIEEFDPLSSKCSTLARSNKSNELLLLEHLLEEDTYGTVKAEQDDVS 664
            |:..:|  |..|.......:.:|...:...:|.|||..|..:..:..:...:.|..|        
  Fly   233 SDTSSC--ASNGFGADCDFVADFGSANIFDATSARSTGSPAVSSVSSVGSSNGYAKV-------- 287

  Fly   665 MCTSEEEPTTSAATSPKPQQPQIVHQNARLLS----DSMENMLDSDQERAKPYLSRMPESANKAS 725
                  :|..:|....:.|..|.:||. :||:    ...||..|.|  .|..|.:..|.:.|   
  Fly   288 ------QPIRAAHLQQQQQLQQQLHQQ-QLLNGNGHQGTENFADFD--HAPIYNAVAPPTFN--- 340

  Fly   726 GPVDLASASRNRTNW----FVPDKASCSDVTPNTSKTTP---PIEGDSPPTYLEAIGGSKDAAGN 783
               |..|      :|    |......|.|..|......|   |.:..:..:.|..:....:.|.|
  Fly   341 ---DWIS------DWSRRGFHDPFDDCDDSPPGARPPAPAPAPAQVPAVSSPLPTVREEPELAWN 396

  Fly   784 QENRSTIGSRFRQTINAISNVKLKMDAMKRKASFRGANQRQSDVRVALQMVPRPSLSPLLIRYEG 848
                      |.:            |.|:.:|..:.:..:|.::..:..:.....|||     ..
  Fly   397 ----------FWE------------DEMRIEAQEKESQTKQPELGYSFSISTTTPLSP-----SN 434

  Fly   849 PLVRFPSGVVEDILKEMQNRKAILRERQFQTFLDQEMKTPREMIPLDTITTLQCVSNSRVTDTA- 912
            |.:.:       ::.|.|:|                 ..|.:  |..:.:....:|||...|.| 
  Fly   435 PFLPY-------LVSEEQHR-----------------NHPEK--PSFSYSLFSSISNSSQEDQAD 473

  Fly   913 --------THFYCFEI---------TTSQPKNGNGA----------------------------- 931
                    .:|:.|..         |||.||.||.|                             
  Fly   474 DHEMNVLNANFHDFFTWSAPLQNGHTTSPPKGGNAAMAPSEDRYAALKDLDEQLRELKASESATE 538

  Fly   932 ---------------GDAMSSNPNLLMTSSSSGNVKQQRVSHLYGVGKESERGVWMQKILESLTN 981
                           |.|:::|||     ...|..:||..||:....::.::....|.:...|| 
  Fly   539 TPTPTSGNVQATDAFGGALNNNPN-----PFKGQQQQQLSSHVVNPFQQQQQQQHQQNLYGQLT- 597

  Fly   982 SLPVKYTCHYYRAGWCYLKNSITSEWSGTWLVLRKSQRRLIFVSEAN 1028
            .:|..|             .|.:.:..|..|:.::.|::..|.:..|
  Fly   598 LIPNAY-------------GSSSQQQMGHHLLQQQQQQQQSFFNFNN 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
drongoNP_001162848.1 ArfGap 15..126 CDD:279720 12/49 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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