DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and Arap2

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:XP_038947855.1 Gene:Arap2 / 305367 RGDID:1306452 Length:1709 Species:Rattus norvegicus


Alignment Length:1796 Identity:367/1796 - (20%)
Similarity:609/1796 - (33%) Gaps:568/1796 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NINHNNIKKLNINAENLHGNCAEKKLPSSGQNKLI--LQENNSDSQQ-PIYGPDANENVQEPVYA 97
            :||.|.:.::.|:             |:..:.:::  ||...|..|. |||   ||      ||.
  Rat    40 SINDNVLHQIGIS-------------PTGHRRRILKQLQMIFSKMQDFPIY---AN------VYK 82

  Fly    98 TPRPAPRQRLPPAGEPEDSYPDPDDEVPLRILRAAPQIPPKPLNILLDQRSSICSEVS-TTSVQT 161
            |..         ...|::.:..|...                        |:.|.|.| :.:|..
  Rat    83 TKN---------GSTPKEQHSAPSSS------------------------SNTCIEFSDSVTVHR 114

  Fly   162 PGKADEDREGSRYASNASLDCSESSHSGKFKSQSPGYVDAVDSSIPQSDHPDPNGHHPQAESSSA 226
            ||.|..:...:...|..  :|..|:...|.             |:..||.|.|.....|...||.
  Rat   115 PGPAPSEMVTTNVLSEG--NCHSSTSHDKL-------------SLSSSDLPCPEEEICQNVDSSQ 164

  Fly   227 EQSSGSQDGDDDNNLLRSLGTTSKLLGEAIGERITFKAKGAKKRLDRNFKSSTEAISNIGADAGR 291
            :...|..:...|:.:.:.  ......||...|::...::.:.|.|:.|    ||.:.::  |...
  Rat   165 DYLFGRVNVKIDSLITQQ--AVEHTAGEEQTEKVNLVSEDSSKALNTN----TECLPSV--DHPA 221

  Fly   292 SLKHASKRFGSNFSLGRNKDKADIGIGGRPGGSGEMDLDRRQTMPSTEVFNTIQFSSPLNRNGGL 356
            |..|...  |:|..|                          ::.|.:..|   ||...:..|   
  Rat   222 SETHCGN--GTNGVL--------------------------ESFPPSPFF---QFQGEMVVN--- 252

  Fly   357 PDLRENDAKLQKEDYLRPDPDQEDDGCYEVPKTQGK---PPSYDEALRSRPSPSDSPMSRNLAQE 418
                        |.|:...|      .:...:::.|   .||....||.||.|.....:::::..
  Rat   253 ------------ELYVPSSP------IHSPMRSRSKLVSRPSRSFLLRHRPVPEIPGSTKSISGS 299

  Fly   419 AAQLVQLRNQRQLSSSS--------SNGDESPRLPMPAFPPPRLSQQPEQFRMDALQPPVRQKRR 475
                 ..|:::.:::|:        :|.|.|..:    ||      ..|.|....|:   ..|:|
  Rat   300 -----YFRDRKSITTSAGKSLTLKDANEDNSTSI----FP------YGETFLFQRLE---SSKKR 346

  Fly   476 --KN--YEHIELRRPPVDSAQLEELNRAAAAAEREESLLISAKNAEAETKTPKPERSDSWEFYGE 536
              ||  :.|             |:..:..||..|...|..|:.....:.|..:.:..|.|....:
  Rat   347 SIKNEFWAH-------------EDTVKEEAATSRNSILTKSSIYDSRKEKVSEDKVEDIWIPRED 398

  Fly   537 DENEEEDRDEEQEGSSSPE-------------------------------PLYANQEATYGKLFE 570
            ..|..:|...|.|.|:..|                               ||.:..|.|......
  Rat   399 KNNLPQDSASESEYSTVEECFQSLRRKNSKASKSRTQKAFYLDPFNRHSYPLSSTSENTDPSTIA 463

  Fly   571 MATA------GSSRSNV-------LTPNQVAEQQQ---------LACITEDSELDACEGAVGGVP 613
            .|.:      |||.:.|       |:|......|:         ::....|.|:    .:.|.:|
  Rat   464 NAISPYACFYGSSAAKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNDREM----YSKGIIP 524

  Fly   614 LPQAVI------EEFDPLSSKCSTLARSNKSNE-----LLLLEHL----LEEDTYGTVKAEQ--- 660
            |.....      .:|:.::::.:.:.|..|..|     .:||..|    |.......|..|:   
  Rat   525 LTAISTVRAQGDNKFEIVTTQRTFVFRVEKEEERNDWISVLLSALKSPSLTSQLQAAVAPEKCGY 589

  Fly   661 ----------------DDVSMCTSEEEPTTSAATSPKPQQPQIVHQNARLLSDSMENM------- 702
                            :.|.:|.:|::..:....:..|.....|.|..|.:..|.|.:       
  Rat   590 LELRGYKAKIFTVLRGNSVWLCKTEQDFKSGLGITIIPMNVANVKQIDRAVKQSFEIITPYRSFS 654

  Fly   703 --LDSDQERAKPYLSRMPESANKASGPVDLASASRNRTNWFVPDKASCSD--------------- 750
              .||::|: :.::..:.:|..:.....::|...     ||.....||:|               
  Rat   655 FTADSEKEK-QEWIEAVQQSIAETLSDYEVAEKI-----WFNESNRSCADCKAPDPDWASINLCV 713

  Fly   751 ------------VTPNTSKTTPPIEGDSPPTYLEAIG-----GSKDA----AGNQENRSTI---- 790
                        :.|..||.. .::.|:.....|.|.     |:|.|    |||.:....|    
  Rat   714 VICKKCAGQHRSLGPKDSKVR-SLKMDASIWSNELIELFIVIGNKRANDFWAGNLKKDEEIQMDS 777

  Fly   791 --------------GSRFRQTI----------NAISNVKLKMDAMKRKA-SFRGANQRQSDVRVA 830
                          ..:||:|.          .|:....:|.|.::..| .|.||     ||..|
  Rat   778 PVDKRKIFITQKYKEGKFRKTFLASLTKEELNKALCAAVVKPDVLETMALLFSGA-----DVMCA 837

  Fly   831 -------------------LQMVPRPSLSPLLIRYEGPLVRFP---------------------- 854
                               |||.         ..|......||                      
  Rat   838 TGDPVHCTPYLLAKKAGQSLQME---------FLYHNKFSDFPQYDAHSEGGSSQEATQSTFLCD 893

  Fly   855 ---------SGV-VEDILKEMQNRKAILRERQFQTFLDQE-MKTPREMIPLDTITTLQCVSNSRV 908
                     |.| .|..|.|..|:|..:.|..|.::.:.: ..||...|.:..:..|........
  Rat   894 FLYQATASASRVSTEKKLLEETNKKWCVLEGGFLSYYENDRCTTPNGTINISEVICLTVHKEDFY 958

  Fly   909 TDTATHFYCFEITTSQPKNGNGAGDAMSSNPNLLMTSSSSGNVKQQRVSHLYGVGKESERGVWMQ 973
            .:|.. .:.|||                             .:..:|| .|:|......:..|.:
  Rat   959 LNTGP-IFIFEI-----------------------------YLPSERV-FLFGAKTSQIQRKWTE 992

  Fly   974 KI--------LESLTNSLPVKYTCHYYRAGWCYLKN-SITSEWSGTWLVLRKSQRRLIF-VSEAN 1028
            .|        .|:||.:       .|...|..:.|: ....:|...|..:.||.  |.| :....
  Rat   993 TIAKRFVPFVAENLTEA-------DYDLIGQLFYKDCHALDQWRKGWFAMDKSS--LCFCLQTQE 1048

  Fly  1029 GNVEKMDLRKARCIVLK---ESDESID-NLHVESGPMLMIDCPPYAVYMIMSSARETKIWRHIIR 1089
            ...|:|.||:.:.:.:.   ::.|.:| .|.||.|..|         |:...:..:..:||:.|.
  Rat  1049 AQEERMHLRRLQELTISTVVQNGEKVDVLLLVEKGRTL---------YIHGYTKLDFTVWRNAIE 1104

  Fly  1090 EVAHNNGFSLGDQQLTRYDVPVIVDKCINFVYIHGSMSEGIYRKSGSENSMHKLMSAFRADAFNV 1154
            :.|..:|.:|.||||.:.|||:||:.||.||..:|...:.||:|.|...|:.:|:.:|:.||.:|
  Rat  1105 KAAGTDGNTLQDQQLCKNDVPIIVNSCIAFVTQYGLGCKYIYQKDGDPLSISELLESFKKDARSV 1169

  Fly  1155 EITRNEYNEHDVANVLKRFMRDLPERLLGK-LTDSFVFVTELAVASEKIPIYRELLARLSAIERE 1218
            ::...::...||..|||.|:.|:.:.||.| |...:|...:.....::...||..:..|..:.|.
  Rat  1170 KLRVGKHQLEDVTGVLKSFLSDIDDALLTKELYPYWVSALDAQDEKQRTDKYRAFICSLPGVNRA 1234

  Fly  1219 TLRRIVGHLVFISSQQAKNKMSVQNLTMIWGPTLLAKKSDELIYSQKEADVLSDLVVLYKNLFPC 1283
            ||..::.||..:......|.|:..||.:::...|...|..    :.:|.:|:.||:..|..:|..
  Rat  1235 TLAALIEHLYRVQKCSEINHMNAHNLALVFSSCLFQTKGQ----TSEEVNVIEDLINNYVEIFEV 1295

  Fly  1284 SADEIKR-------------EQAMLACLQKYYAAAETLKDAVKQSGDIKIWISLNPNPENKTEEK 1335
            ..|::|:             .||.:.||.|   :.|.||  |.|:||:.|.:.     ..:.|..
  Rat  1296 KEDQVKQMDIENSFITKWKNTQASVHCLMK---SLERLK--VSQAGDLLIEVF-----AERKEPD 1350

  Fly  1336 TQVNATISPTKTAYELCREYSA-KMQLPTHQ--LTLYEVILNDSLERPLHHDTKVFDVILNWSYW 1397
            ..:...:||...|.||..:..| |..|||..  ...:|||.|:.||||||:...|.:.:|.||..
  Rat  1351 CSIIIRVSPVMEAEELTNDILAIKNILPTKGDIWATFEVIENEELERPLHYTENVLEQVLQWSSL 1415

  Fly  1398 PEEDRKH----NYLVVRPVEMLRE--IQRAVKNLATVTPGKEL---RFADSRTKTFKTLQC-ELR 1452
            .|....:    .:|.:..::..||  |:..:..|.. .|.|.|   :|.|         :| .||
  Rat  1416 AEPGSAYLVVKRFLTIDTIKQCREKSIKEGILKLKE-EPSKILSGNKFQD---------RCVVLR 1470

  Fly  1453 DGKIVVSKKDKNDKTTIVREIF-LQSSTAYLGCERKRDFPWSWAIT----------FVERTQAQI 1506
            ||.:.:.|..|:.|.   .::| |:....|||.::|...|.||.:|          ..:..|||:
  Rat  1471 DGHLFIYKDPKSTKH---EKMFPLRLMKFYLGVKKKMKPPTSWGLTACSEKHHWHLCCDSLQAQM 1532

  Fly  1507 MRSRDAPFIGHVLAGSEWGDRTIWYSSIWYCLYRDNILPPA 1547
            .                      |.:||:...:.::|.|||
  Rat  1533 E----------------------WMASIFIAQHENDIWPPA 1551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850 56/182 (31%)
Arap2XP_038947855.1 SAM_Arap1,2,3 6..68 CDD:188889 7/40 (18%)
PH1_ARAP 480..571 CDD:270073 16/94 (17%)
PH2_ARAP 581..671 CDD:270074 14/90 (16%)
ArfGap_ARAP2 676..796 CDD:350081 19/125 (15%)
PH-like 888..998 CDD:418428 23/140 (16%)
PH-like 1011..1106 CDD:418428 24/105 (23%)
RhoGAP_ARAP 1110..1289 CDD:239850 56/182 (31%)
RA_ARAP2 1335..1432 CDD:340747 30/101 (30%)
PH-like 1438..1549 CDD:418428 34/145 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 104 1.000 Domainoid score I6548
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001278
OrthoInspector 1 1.000 - - otm46276
orthoMCL 1 0.900 - - OOG6_104434
Panther 1 1.100 - - O PTHR45899
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.910

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