DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and Git2

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:XP_017453834.1 Gene:Git2 / 304546 RGDID:1359708 Length:761 Species:Rattus norvegicus


Alignment Length:660 Identity:134/660 - (20%)
Similarity:210/660 - (31%) Gaps:176/660 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 LRENDAKLQKEDYLRPDPDQED--------DGCYEVPKTQGKPPSYDEALRSRPSPSDSPMSRNL 415
            ||.||.   ..|...|||....        |.|..|.::.|:..|....|:..|.|         
  Rat     5 LRSNDV---CADCSGPDPSWASVNRGTLICDECCSVHRSLGRHISQVRHLKHTPWP--------- 57

  Fly   416 AQEAAQLVQLRNQRQLSSSSSNGDESPRLPMPAFPPPRLSQQPEQFRMDALQPPVRQKRRKNYEH 480
                ..|:|:     :.:..|||..|........|...:|.:.:....|.:.|...:..|..|:.
  Rat    58 ----PTLLQM-----VETLYSNGANSIWEHSLLDPASVMSGRRKANPQDKVHPNKAEFIRAKYQM 113

  Fly   481 IE-LRRPPV---DSAQLEELNRAAAAAER----EESLLISAKNAEAETKTPKPERSDSWEFYGED 537
            :. :.|.|.   ||...::|::...::.|    |..|.:.:..|:|....|              
  Rat   114 LAFVHRLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHP-------------- 164

  Fly   538 ENEEEDRDEEQEGSSSPEPLYANQEATYGKLFEMATAGSSRSNVLTPNQVAEQ---QQLA----- 594
               |:........|.:.:.|.|...|.||     |..|:..|:..||...|.|   ::||     
  Rat   165 ---EKGSTPLHVASKAGQILQAELLAVYG-----ADPGTHDSSGKTPVDYARQGGHRELAERLVE 221

  Fly   595 ---CITEDSELDACEGAVGGVP---------LPQAVIEEFDPLSSKCSTLARSNKSNELLLLEHL 647
               .:|:......|    |..|         :||.....   ||...|.||::.|.....|..||
  Rat   222 IQYELTDRLAFYLC----GRKPDHKNGQHFIIPQMADRR---LSLDLSELAKAAKKKLQSLSNHL 279

  Fly   648 LEE---DTYGTVKAEQDDVSMCTSEEEPTTSAATSPKPQQPQ------------------IVHQN 691
            .||   |.|..|...:.|.....::...|....|:..|..|.                  ..|:.
  Rat   280 FEELAMDVYDEVDRRETDAVWLATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFNAHEF 344

  Fly   692 ARLLSDSMENMLDSDQERAKPYLSRMPESANKASGPVDLASASRNRTNWFVPDKASC-----SDV 751
            |.|:.|.:.   |:.:.:....|||..::.......|....::.::.| ..||..|.     :||
  Rat   345 ATLVIDILS---DAKRRQQGSPLSRSKDNVELILRTVSNQHSTESQDN-DQPDYDSVASDEDTDV 405

  Fly   752 TPNTSKTTPPIE-----GDSPPTYLE------AIGGSK-----------DAAGN--------QEN 786
            ....|:|.....     .|.|.|..|      |:..|:           :.:|.        |..
  Rat   406 ETRASRTNRQKSLDSDLSDGPVTVQEFMEVKHALVASEAKRQQLMKVNNNLSGELRIMQKKLQTL 470

  Fly   787 RSTIGSRFRQTINAISNVKLKMD--------AMKRKASFRGAN--------------------QR 823
            :|...|..||...:...|:...|        ::||:.|.||:.                    ..
  Rat   471 QSENSSLRRQATASACQVQTASDHKDTVSHSSLKRRPSARGSRPMSMYETGSGQKPYLPMGEANH 535

  Fly   824 QSDVRVALQMVPRPSLSPLLIRYEGPLVRFPSGVVEDILKEMQNRKAILRERQFQTFLDQEMKTP 888
            ..:.|..||..|.......|:.....|..|||.:  ...::...|:|...|:|..|.......|.
  Rat   536 PEESRTRLQPFPTHIGRSALVTSSSSLPSFPSTL--SWSRDESTRRASRLEKQNSTPESDYDNTA 598

  Fly   889 REMIPLDTIT 898
            .:..|.||::
  Rat   599 YDPEPDDTVS 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
Git2XP_017453834.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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