DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and Git2

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:XP_006530402.1 Gene:Git2 / 26431 MGIID:1347053 Length:761 Species:Mus musculus


Alignment Length:668 Identity:127/668 - (19%)
Similarity:197/668 - (29%) Gaps:239/668 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 PGYVDAVDSSIPQSDHPDPNGHHPQAESSSAEQSSGSQDGDDDNNLLRSLGTTSKLLGEAIGERI 260
            ||..|:  |.....|:....|||..||.....|..                         :.:|:
Mouse   193 PGTQDS--SGKTPVDYARQGGHHELAERLIEIQYE-------------------------LTDRL 230

  Fly   261 TFKAKGAK------------KRLDRNFKSSTEAISNIGADAGRSLKHASKRFGSNFSLGRNKDKA 313
            .|...|.|            :|.||.....   :|.:...|.:.|:..|.......::    |..
Mouse   231 AFYLCGRKPDHKSGQHFLIPQRADRRLSLD---LSELAKAAKKKLQSLSNHLFEELAM----DVY 288

  Fly   314 DIGIGGRPGGSGEMDLDRRQT-------------------MPSTEV-----------------FN 342
            |             ::|||:|                   :|...|                 ||
Mouse   289 D-------------EVDRRETDAVWLATQNHSTLVTETTVVPFLPVNPEYSSTRNQGRQKLARFN 340

  Fly   343 TIQF--------SSPLNRNGGLPDLREND------------AKLQKEDYLRPDPD----QEDDGC 383
            ..:|        |....|..|.|..|..|            ...:.:|..:||.|    .||...
Mouse   341 AHEFATLVIDILSDAKRRQQGSPLSRSKDNVELILRTVSTQHSTESQDNDQPDYDSVASDEDTDV 405

  Fly   384 YEVPKTQGKPPSYDEALRSRPSPSDSPM---------SRNLAQEA--AQLVQLRN---------Q 428
            ........:..|.|..|      ||.|:         |..:|.||  .||:::.|         |
Mouse   406 ETRASKANRQKSLDSDL------SDGPVTVQEFMEVKSALVASEAKRQQLMKVNNNLSDELRIMQ 464

  Fly   429 RQLSSSSSNGDESPRLPMPAFPPPRLSQQPEQFRMDALQPPVRQKRRKNYEHIELRRPP------ 487
            ::|.:..|......|                |....|.|.......:....|..|:|.|      
Mouse   465 KKLQTLQSENSSLRR----------------QATASACQVQTGSDHKDTASHSSLKRRPSARGSR 513

  Fly   488 ------VDSAQLEELNRAAAAAERE-------------ESLLISAKNAEAETKTPKPERSDSWEF 533
                  ..|.|...|....|:...|             .|.|:::.::     .|....:.||  
Mouse   514 PMSMYETGSGQKPYLPMGEASHPEESRTRLQPFPTHIGRSALVTSSSS-----LPSFPSTLSW-- 571

  Fly   534 YGEDEN-EEEDRDEEQEGSSSPEPLYANQEATYGKLFEMATAGSSRSNVLTPNQVAEQQQLACIT 597
             ..||: ....|.|:|  :|:||..|.|.....    |....||:|..          :|.:.:.
Mouse   572 -SRDESARRASRLEKQ--NSTPESDYDNTACDP----EPDDTGSTRKG----------RQRSMLW 619

  Fly   598 EDSELDACEGAVGGVPLP-----QAVIEEFDPLSSKCSTLARSNKSNELLLLEHLLEEDTYGTVK 657
            :...|.........||.|     :.||.:.:.::.....|.|:.:.|         :.|:| ...
Mouse   620 QGDGLLPDTAEPHSVPSPTLPSTEDVIRKTEQITKNIQELLRAAQEN---------KHDSY-IPC 674

  Fly   658 AEQDDVSMCTSEEEPTTSAATSPKPQQPQIVHQNARLLSDSMENMLDSDQERAKPYLSRMPESAN 722
            :|:..|::       |..||..||..:...|..:.|||:.|... |.|:..:|.|..|.:|....
Mouse   675 SERIHVAV-------TEMAALFPKKPKSDTVRTSLRLLTSSAYR-LQSECRKALPGDSSLPTDVQ 731

  Fly   723 KASGPV-----DLASASR 735
            ..:..|     |:|.|::
Mouse   732 LVTQQVIQCAYDIAKAAK 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
Git2XP_006530402.1 ArfGap_GIT2 1..111 CDD:350072
Ank_2 137..229 CDD:372319 11/62 (18%)
ANK repeat 137..165 CDD:293786
ANK repeat 167..197 CDD:293786 2/3 (67%)
GIT_SHD 268..296 CDD:369921 8/44 (18%)
GIT_SHD 332..360 CDD:369921 5/27 (19%)
GIT_CC 416..480 CDD:374629 17/85 (20%)
GIT1_C 640..754 CDD:371961 29/128 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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