DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and Appl2

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:NP_660255.1 Gene:Appl2 / 216190 MGIID:2384914 Length:662 Species:Mus musculus


Alignment Length:637 Identity:109/637 - (17%)
Similarity:196/637 - (30%) Gaps:220/637 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   546 EEQEGSSSPEPLYANQ-----EATYGKLFEMATAGSSRSNVLTPNQVAEQQQLACITEDSELDAC 605
            ||..|:.:.   |.||     :..||...||..|....|..|.   ..|:|..|....|.|:   
Mouse    27 EEDAGTLTD---YTNQLLQAMQRVYGAQNEMCLATQQLSRQLL---AYEKQNFALGKGDEEV--- 82

  Fly   606 EGAVGGVPLPQAVIEEFDPLSSKCSTLARSNKSNELL---------LLEHLLEEDTYGTVKAEQD 661
               :..:.....|::|.:.|.::   ||:......:|         |.|....:|.:|...:|. 
Mouse    83 ---ISTLHYFSKVMDELNGLHTE---LAKQLADTMVLPVIQFREKDLTEVSTLKDLFGLASSEH- 140

  Fly   662 DVSMC------------TSEEEPTTSAATSPKPQ------------------------------- 683
            |:||.            .::.|.....|.:.:.|                               
Mouse   141 DLSMAKYSRLPKKKENEKAKTEIVKEVAAARRKQHLSSLQYYCALNALQYRKRAAMMEPLIGFAH 205

  Fly   684 -QPQIVHQNARLLSDSMENMLDSDQERAKPYLSRMPESANKA---------------SGPVDLAS 732
             |.....:.|.:.|.||:..|.|.::..:.....:...|:|.               :..:|:|:
Mouse   206 GQINFFKRGAEMFSKSMDGFLSSVKDMVQSIQVELEAEADKMRVSQQELLSVSESVYTPDIDVAT 270

  Fly   733 ASRNR-------------------TNW-----------------------FVPDKASCS------ 749
            |..||                   |.|                       .:.|..:||      
Mouse   271 AQINRNLIQKTGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAVAGGLIQDLDNCSVMAVDC 335

  Fly   750 -------DVTPNTSKTTPPIEGDSPPTYLE---AIGGSKDAAGNQENRSTIGSRFRQT-INAISN 803
                   .::..:.|....::.:|...|.|   |:..........:|...:..:..|| :.|:: 
Mouse   336 EDRRYCFQISTPSGKPGIILQAESRKEYEEWICAVNNISRQIYLTDNPEAVAIKLNQTALQAVT- 399

  Fly   804 VKLKMDAMKRKASFRGANQRQSDVRVALQMVPRPSLS------------PLLIRYEGPLVRF--- 853
             .:.....|:::|....|.:.||:... .:||:.:.|            |:......|...|   
Mouse   400 -PITSFGKKQESSCSSQNIKNSDIEDD-NIVPKATASIPETEELIAPGTPIQFDIVLPATEFLDQ 462

  Fly   854 --------PSGVVED---------ILKEM-------------QNRKAILRERQFQTFLDQEMKTP 888
                    |.|..||         :|::|             .:...::.|...|....:.:...
Mouse   463 NRGGRRTNPFGETEDGSFPEAEDSLLQQMFIVRFLGSMAVKTDSTAEVIYEAMRQVLAARAIHNI 527

  Fly   889 REMIPLDTITTLQCVSNSRVTDTATHF--YCFEITT-----SQPKNGNGAGDAM----SSNPNLL 942
            ..|.....:.|.|.:   |:.|..|..  .|||:|:     :..:|....|..:    |:....|
Mouse   528 FRMTESHLMVTSQTL---RLIDPQTQVSRACFELTSVTQFAAHQENKRLVGFVIRVPESTGEESL 589

  Fly   943 MTSSSSGNVKQQRVSHLYGVGKESERGVWMQKILESLTN---SLPV----KY 987
            .|.....|.:.:::.:...:|||.   :.:||..|:|..   |:|:    ||
Mouse   590 STYIFESNSEGEKICYAINLGKEI---IEVQKDPEALARLMLSVPLTNDGKY 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
Appl2NP_660255.1 BAR_APPL2 20..234 CDD:153316 42/222 (19%)
BAR-PH_APPL 252..376 CDD:270067 15/123 (12%)
PH 278..378 CDD:278594 10/99 (10%)
PH domain 278..376 10/97 (10%)
PTB_APPL 480..613 CDD:269980 22/135 (16%)
PTB domain 491..607 19/118 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 642..662
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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