DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and F07F6.4

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:NP_495029.2 Gene:F07F6.4 / 173927 WormBaseID:WBGene00017217 Length:529 Species:Caenorhabditis elegans


Alignment Length:484 Identity:99/484 - (20%)
Similarity:163/484 - (33%) Gaps:149/484 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 CYEVPKTQGKPPSYDEALRSRPSPSDSP--MSRNLAQEAAQLVQLRNQRQL----SSSSSNG--- 438
            |.|..:..|.....|....:...|::..  .:::....:|....|.:...:    |..|::|   
 Worm   124 CQEAQRKFGTQLIIDTVTHAEEKPAEEEDFFAQDFGHTSASATSLSSDAYIADHKSEDSTHGPSV 188

  Fly   439 ---DESPRLPMPAFPPPRLSQQPEQ-----FRMDALQPPVRQKRRKNYEHIELRRPPVDSAQLEE 495
               |.|..:|..| |...:.::|.:     .:.:||.   .||.|.|::.||.|           
 Worm   189 DHLDSSVAVPTSA-PVSVILKKPIKKATLGAKKNALG---AQKVRINFDEIEQR----------- 238

  Fly   496 LNRAAAAAEREESLLISAKNAEAETKTPKPERSD--------SWEFYGEDENEEEDRDEEQEGSS 552
                ||..||:.:..::|.....:|:....::||        |.:|..:|.:.:.   ::.|...
 Worm   239 ----AAEKERQTAAEVAANKLAYQTELDGKKKSDDAAALQKLSAKFAMQDIDAQR---KQMEAKV 296

  Fly   553 SPEPLYANQEATYGKLFEMATAGSSRSNVLTPNQVAEQQQLACITEDSELDACEGAVGGVPLPQA 617
            :.:|..|......|    |...|.||                         |.....||:    .
 Worm   297 AKDPTKAASVDRLG----MGGVGRSR-------------------------AAHSVAGGI----R 328

  Fly   618 VIEEFDPLSSKCSTLARSNKSNELLLLEHLLEEDTYGTVKAEQDD-----------VSMCTSEEE 671
            .|::.|.|:.|..:..:.:...|::       :|.||......:|           ....|.|::
 Worm   329 SIKQDDVLTFKKPSQPKEDDDWEVI-------DDKYGKKSTNNEDDFFSKDYTSSSSKKTTKEDD 386

  Fly   672 PTTSAATSPKPQQPQIVHQNARLLSDSMENMLDSDQERAKPYLSRMPESANKASGPVDLASASRN 736
            ...|..|.|.        |.:|..:.|      |....::...:|:...|:..| .|||.....|
 Worm   387 FFDSFETQPV--------QKSRYTASS------SSSSTSRAPTTRLTAGASPIS-DVDLQKKFGN 436

  Fly   737 RTNWFVPDKASCSDV---TP----NTSKTTPPIEGDSPPTYLEAIGGSKDAAGNQENRSTIGSRF 794
            .       ||..||:   ||    .|.......||       :...||:|..||       ||:.
 Worm   437 A-------KAISSDMYFGTPEMDCETRSALTKCEG-------QTSFGSEDLWGN-------GSQQ 480

  Fly   795 RQTINAISNVKLKMDAMKRKASFR-GANQ 822
            ||:    |.|.   |....|.||| ||::
 Worm   481 RQS----SQVP---DMSDLKDSFRAGASK 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
F07F6.4NP_495029.2 ArfGap 16..129 CDD:214518 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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