DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP15B and F07F6.8

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:NP_001379858.1 Gene:F07F6.8 / 173926 WormBaseID:WBGene00017220 Length:318 Species:Caenorhabditis elegans


Alignment Length:345 Identity:74/345 - (21%)
Similarity:123/345 - (35%) Gaps:99/345 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   963 GKESE-RGVWMQKILESLTNSLPVKYTCHYYRAGWCYLKNSITSEWSGT-----WLVLRKSQRRL 1021
            |.:|| .||.:...||||                 .::..|::.|.|.|     :|:.:.|..|.
 Worm    11 GSQSEDNGVPIYDSLESL-----------------LFIPRSMSKELSETALRTQFLLDKWSNNRR 58

  Fly  1022 IFVSEANGNVEKMDLRKARCIVLKESDESI---DNLHVESGPMLMIDCPPYAVY-MIMSSARETK 1082
            ..|.:..|..||:|..:..|.:......::   ..:.|..|.:||   ||.|:. :|:.:|....
 Worm    59 KIVRQMEGIAEKLDNWEKGCAISTAVGSTVGIASGIAVIGGLILM---PPVAIAGLIVGTASGVS 120

  Fly  1083 IWRHIIREVAHNNGFSLGDQQLTRYDVPVIVDKCINFVYIHGSMSEGIYRKSGSENSMHKLMSAF 1147
            .....|.:..|..|        ...:|..::.:       .|.:.|.:.:      |..:||.|.
 Worm   121 NLATGITKFFHTKG--------QHKEVAAMIAE-------DGVLFEELLK------SREELMEAV 164

  Fly  1148 RADAFNVEITRNEYNEHDVANVLKRFMRDLPERLLGKLTDSFVFVTELAVASEKIPIYRELLARL 1212
            |....:.|..::..|:.|:.|.||....       |.:|......|..|:.|         :.||
 Worm   165 RKIVEDEEFFKHFKNDGDIENKLKTVFG-------GSVTGITGIGTRFAITS---------MGRL 213

  Fly  1213 SAIERETLRRIVGHLVFI-----------SSQQAKNKMSVQNLTMIWGPTLLAKKSDELIYSQK- 1265
            |:    :|.:.|.|.|.:           .|.:...:.||..|    |.::|...|...:..|| 
 Worm   214 SS----SLVKGVLHSVAVIGIVLDSVTLALSAKTLGEGSVSEL----GSSILEASSKMEMMRQKV 270

  Fly  1266 ------------EADVLSDL 1273
                        :.|||||:
 Worm   271 VKHFLNEDVWKDDDDVLSDV 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850 41/203 (20%)
F07F6.8NP_001379858.1 ApoL <59..>126 CDD:398882 15/69 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.