DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and arap2

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:XP_031751219.1 Gene:arap2 / 100494395 XenbaseID:XB-GENE-991948 Length:1566 Species:Xenopus tropicalis


Alignment Length:1506 Identity:303/1506 - (20%)
Similarity:555/1506 - (36%) Gaps:380/1506 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 DNNLLRSLGTTSKLLGEAIGERITFKAKGAKKRLDRNFKSSTEAISNIGADAGRSLKHASKRFGS 302
            ::.:|:.:|.:  |.|..  :||..|.:..::::.|..::|....|:  ::...|:.|.||...:
 Frog    45 NHEILQEMGIS--LTGHR--KRIIAKLQSIQEQMRRESRNSDSLTSD--SELQNSITHGSKPLDT 103

  Fly   303 NFSLGRNKDKADIGIGGRPGGSGEMDLDRRQTMPSTEVFN--TIQFSSPLNRNGGLPDLRENDAK 365
            ...:......:.:.....|..|           ||.|..|  |.|:....:.|........|:..
 Frog   104 ILPVSEQVQGSTMEYNASPDSS-----------PSKEADNNSTCQYQQKEDSNDQFNRTGLNEKS 157

  Fly   366 LQKEDY--------LRPDPDQEDDG------------CYEVPKTQG------KPPSYDEALRSRP 404
            |:.:|:        |....|.::.|            .|:..|..|      .||:....||:||
 Frog   158 LEIKDHSVKDFPLDLETQLDSQNSGFFEFQGPMVDNEIYDKSKDDGHKPLLKSPPTKSFILRNRP 222

  Fly   405 SP------SDS-----PMSRNLAQEAAQLVQLRNQRQLSSSSSNGDESPRLPMPAFPPPR----- 453
            .|      ||:     ...|.|..:|||        :.|:|.....||....:....|..     
 Frog   223 VPKLPFNTSDTFVKSCHQERRLENKAAQ--------ESSASKQQNQESQEQNINLISPYEETFFS 279

  Fly   454 LSQQPEQFRMDALQ-PPVRQKRRKNYE----------HIELRRPPVDSAQLEELNRAAAAAEREE 507
            .|:.|::...|..| |...::..|:.|          ......||....|:.           ||
 Frog   280 NSEFPKETSRDKFQFPSYHEQNEKSLEKNASTSCGSLSANNGSPPPPGDQIS-----------EE 333

  Fly   508 SLLISAKNAEAETK-------TPKPERSDSWEFYGEDENEEEDRDEEQEGSSSPEPLYANQEATY 565
            |:..:.:....|.:       ||.|..|         .:.:.....|.||:.|....||   ..|
 Frog   334 SIYSTMEECTRELRVNRGIGMTPDPAAS---------LHTDSGTSSELEGAESEISPYA---CFY 386

  Fly   566 GKLFEMATAG------SSRSNVLTPNQV-AEQQQLACITEDSELDACEGAVGGVPLPQAVIE--- 620
            |.....|..|      ..||.:.....| .:...|:....|.::    .:.|.:.|| |:.:   
 Frog   387 GPSTMPAKTGWLEKLSPHRSGIFQKRWVKVDGMHLSYYNNDRDM----FSKGKISLP-AITKVNK 446

  Fly   621 ----EFDPLSSKCSTLARSNKSNELLLLEHLLEEDTYGTVKAEQDDVSMCTSEEEPTTSAATSPK 681
                :|:.::.:.:.:.|:.|           |||     :.:..|..:.||:.||.        
 Frog   447 MGESKFEVVTVQRTFVFRTEK-----------EED-----RDDWIDTLLRTSKSEPY-------- 487

  Fly   682 PQQPQ--IVHQNARLLSDSMENMLDSDQERAKPYLSRMPESANKASGPVDL-------------- 730
             :.|.  :..:|..|.....:|.:.:....:|.:.|:..:.|:......||              
 Frog   488 -EFPDLCVTEKNGYLELKGYKNKIYAVINGSKLWFSKSKQDASAGIAITDLTLTMVSVKIIDRKS 551

  Fly   731 -------------ASASRNRTN----------------------WFVPDKASCSDVTPNTSKTTP 760
                         |.:.|.:..                      ||.....||:|          
 Frog   552 FELTTPFRHFCLTAESEREKQEWTEEIQQSIAETLADYEVAEKIWFNESNRSCAD---------- 606

  Fly   761 PIEGDSPPTYLEAIGG--SKDAAGNQENRSTIGSRFRQTINAISNVKLKMDAMKRKASFRGANQR 823
             ....||.....::|.  .|:.||...   .:||...:..:.|.:..:..:.:.......| |::
 Frog   607 -CRAPSPDWASISLGVVICKNCAGQHR---ALGSNISKVHSLILDTTIWSNELVELFIVVG-NEK 666

  Fly   824 QSDVRVA-------LQMVPRPSLSPLLI--RY-EGPL--VRFPSGVVEDILKEMQNRKAILRERQ 876
            .:::..|       |.|....|...|.|  :| ||..  :.||....|::.:.:.:  |:.::..
 Frog   667 VNNIWEANLLPENMLHMDSNVSQRRLFITQKYKEGRFKKIYFPGFTQEELNQALCD--AVTKDEI 729

  Fly   877 FQTFL-------------DQEMKTPREMIPLD-TITTLQCVSNSRVTD---------TATHFYCF 918
            .||.:             |:...||..:..:. ....::.:.::|::|         .|:.|||.
 Frog   730 LQTMILVFSGADTMCPTGDKVYNTPYLLAKMSGQRLQMEFLHHNRLSDFKAPSLNANGASLFYCG 794

  Fly   919 EITTSQPKN------------------------------------GNGAGDAMSSNPNLLMTSSS 947
            .:..:.|..                                    .:|..|.......::..|..
 Frog   795 FLYKASPSTKMTINRKSKEVPEMKQWWCTIENNFLKYYENETAPVADGVIDLSEIISLVIHPSDF 859

  Fly   948 SGN----------VKQQRVSHLYGVGKESERGVWMQKILESLTNS-----LPVKYTCHYYRAGWC 997
            |.|          ...:|: .|:|......|..|.:.|.::.|.:     |.:.:..    .|:.
 Frog   860 SSNGMAAFTFEIYFLSERM-FLFGAENVESRREWSRAIAKNFTPAVEGYLLELDFNV----LGYL 919

  Fly   998 YLKNSIT-SEWSGTWLVLRKSQRRLIFVSEAN-GNVEKMDLRKARCIVLKESDESIDNLHVESGP 1060
            ..|||.: |:|...|..|.|:  ||.:.::.: ||.:.:.|:|     |:|...:...|:.|.|.
 Frog   920 NYKNSSSLSQWKKGWFALEKA--RLHYCNKDDCGNADTIQLKK-----LQELTANSSTLNGEKGN 977

  Fly  1061 MLMIDCPPYAVYMIMSSARETKIWRHIIREVAHNNGFSLGDQQLTRYDVPVIVDKCINFVYIHGS 1125
            :|::.......|:...:..:..:|...|.:.|..:|.:|.||||::.::|:||:.||.||..:|.
 Frog   978 ILLLVENGRTFYIHGHTMLDFTVWHSAIEKAAGTDGNALQDQQLSKNNIPIIVNSCIAFVTQYGL 1042

  Fly  1126 MSEGIYRKSGSENSMHKLMSAFRADAFNVEITRNEYNEHDVANVLKRFMRDLPERLLGK-LTDSF 1189
            .|:.:|.|:|:...:.:|:..|:.||.::::...::...||.:|||.|..::.:.||.| |...:
 Frog  1043 GSKSLYLKNGNPLQVRELLEEFKKDARSIKLKVGKHQLEDVTDVLKYFFYEIDDALLTKELYPYW 1107

  Fly  1190 VFVTELAVASEKIPIYRELLARLSAIERETLRRIVGHLVFISSQQAKNKMSVQNLTMIWGPTLLA 1254
            :...::....|::..|:.:::.:.|:.:.||..::.||..|......|.:..|.|...:...|..
 Frog  1108 ISALDIRNEQERVKKYKTVISTVPALNKATLAALIEHLFRIQKCFDINHLDTQTLAKAFSSCLFQ 1172

  Fly  1255 KKSDELIYSQKEADVLSDLVVLYKNLFPCSADEIKREQAMLACLQKYYAAAETLKDA-VKQSGDI 1318
            ...:    ::||..||.||:..|.|:|..|.|::::.:.....:.|:       |:| :..|||:
 Frog  1173 TNGE----NEKEVAVLEDLITNYVNIFNVSEDQVQQMETENRFITKW-------KEAQICHSGDL 1226

  Fly  1319 KIWISLNPNPENKTEEKTQVNATISPTKTAYELCREYSAKMQLPTHQLT------LYEVILNDSL 1377
            .|.:.:     .:.|....|...:.||....||.   :..|.:....||      .:|||.|..|
 Frog  1227 LIEVYV-----ERKEPDMCVIIRVPPTMETAELT---NCAMGIKNITLTKEMPWATFEVIENGEL 1283

  Fly  1378 ERPLHHDTKVFDVILNWSYWPEEDRKHNYLVVRPVEMLREIQRAVKNLATVTPGKE--------- 1433
            ||.:|:..||.:.:|.||  ...|....||:|:| ...|::         .|||.:         
 Frog  1284 ERLMHYKEKVLETVLQWS--SLSDPGAAYLLVKP-HNTRDM---------TTPGLKSSHHMQSGH 1336

  Fly  1434 LRFADSRTK-----TFKTLQCELRDGKIVVSKKDKNDKTTIVREIFLQSSTAYLGCERKRDFPWS 1493
            ::|.:..:|     .|:.....||:.|:::.|..|:.|..  :|:.:.|...|.|.::|...|.|
 Frog  1337 MKFKEDPSKLLSGNKFQERYFVLRERKLLLYKDIKSIKPE--KELLVTSCKVYAGVKKKMKPPTS 1399

  Fly  1494 WAIT-FVERTQ 1503
            |.|| :.|:.|
 Frog  1400 WGITIYSEKHQ 1410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850 50/182 (27%)
arap2XP_031751219.1 SAM_superfamily 10..71 CDD:417767 7/29 (24%)
PH-like 394..481 CDD:418428 17/107 (16%)
PH-like 495..579 CDD:418428 10/83 (12%)
ArfGap_ARAP2 584..704 CDD:350081 25/134 (19%)
PH-like 789..900 CDD:418428 15/111 (14%)
PH-like 913..1008 CDD:418428 24/105 (23%)
RhoGAP_ARAP 1012..1191 CDD:239850 50/182 (27%)
Ubiquitin_like_fold 1223..1320 CDD:421700 31/107 (29%)
PH-like 1333..1439 CDD:418428 21/80 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 101 1.000 Domainoid score I6827
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001278
OrthoInspector 1 1.000 - - otm49356
Panther 1 1.100 - - O PTHR45899
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.010

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