DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and acap3b

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:NP_001076484.1 Gene:acap3b / 100009646 ZFINID:ZDB-GENE-070209-274 Length:846 Species:Danio rerio


Alignment Length:570 Identity:115/570 - (20%)
Similarity:186/570 - (32%) Gaps:193/570 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 KRLDRNFKSSTEAISNIGADAGRSLKHASKRFGSNFSLGRNKDKADIGIGGRPGGSGEMDLDRRQ 333
            :||||....||.:|.:......|.::                              |:..|.|.|
Zfish   376 ERLDRTASPSTSSIDSASEPRERVVR------------------------------GDSILQRVQ 410

  Fly   334 TMPSTEVFNTIQFSSP-----------------LNRNGGLPDLRENDAKLQKEDYLRPD------ 375
            .:|..|:......|.|                 ::|:.|:...:.....|   |...|:      
Zfish   411 CLPGNEICCDCGQSDPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTL---DTWEPELMKLMC 472

  Fly   376 ------PDQEDDGCYEVPKTQGKPPSYDEALRSRPSPSDSPMSRNLAQEAAQLVQLRNQRQLSSS 434
                  .:|..:|..|           ::.|: :|.|:.|...:. |...|:.|:.:..:::..|
Zfish   473 ELGNTVINQIYEGACE-----------EQGLK-KPGPNSSRQEKE-AWIKAKYVERKFLKKMCGS 524

  Fly   435 SS---NGDESPRLPMPAFPPPRLSQQPEQFRMDALQPPVRQKRRKNYEHIELRRPPVDSAQLE-- 494
            .:   .|.:|          ...|.:..:....:::.|   |.|:.|.|        |:|.:.  
Zfish   525 EALLEGGRKS----------HHWSVKKCRRHNSSIRAP---KTRRKYRH--------DAAIMSPG 568

  Fly   495 ELNRAAAAAE-REESL--------LISAKNAEAETKTPKPERSDSWEFYGED------------- 537
            .|:.|||||: |.|||        |.|..:..:..::|....|||......|             
Zfish   569 NLSAAAAAAKFRRESLFCPDELDSLFSYFDTGSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVD 633

  Fly   538 ---ENEEEDRDE-------EQEGSSSPEP---------LYANQEATYGKLFEMATAGSSRSNVLT 583
               |.|.||.||       ||| :|.||.         |:....|....:...|.|..:..|.::
Zfish   634 SVTEEECEDSDESSGEVDIEQE-ASDPEDGRELDPNTLLHKASRARNMPVMAEALAHGADVNSVS 697

  Fly   584 PNQVAEQQQLACITEDSELDACEGAV-GGVPLPQAVIEEFDPL---------SSKCSTLARSNKS 638
            ....::...:..:|..| |.|||..: .|..:.|..|....||         ...|..|.|....
Zfish   698 EEDESKSPLIQAVTGGS-LIACEFLLQNGADVNQRDIRGRGPLHHATCLGHTGQVCLFLKRGAGQ 761

  Fly   639 NELLLLEHLLEEDTYGTVKAEQDDVSMCTSEEEPTTSAATSPKPQQPQIVHQNARLLSDSMENML 703
            .|       ::||       .||.:|:       ...||.:......::...|        |.|.
Zfish   762 ME-------VDED-------GQDPLSI-------AVQAANADIVTLLRLARMN--------EEMR 797

  Fly   704 DSDQERAKPYLS------RMPESANKASGPVDLASASRNRTNW--FVPDK 745
            ::|....:|..|      |:...:.:|| |..|:|....|| |  :.|.|
Zfish   798 EADGPLGQPDASVPVSPLRVKRKSLRAS-PRSLSSFGSFRT-WLIYTPPK 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
acap3bNP_001076484.1 BAR_ACAP3 16..215 CDD:153321
PH 269..363 CDD:278594
PH_ACAP 271..367 CDD:270070
ArfGap 403..520 CDD:279720 22/132 (17%)
ANK repeat 666..697 CDD:293786 5/30 (17%)
ANK 668..787 CDD:238125 27/140 (19%)
Ank_2 671..759 CDD:289560 19/88 (22%)
ANK repeat 699..732 CDD:293786 8/33 (24%)
ANK repeat 734..759 CDD:293786 5/24 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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