DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13001 and vab-23

DIOPT Version :9

Sequence 1:NP_573181.1 Gene:CG13001 / 32684 FlyBaseID:FBgn0030806 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001022535.1 Gene:vab-23 / 174826 WormBaseID:WBGene00014153 Length:253 Species:Caenorhabditis elegans


Alignment Length:350 Identity:84/350 - (24%)
Similarity:129/350 - (36%) Gaps:123/350 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATSEISSSNERH-----------YYAKLEAIKDIRDKTLSLEKLKVRIIKEVKLSDDEEKCLEE 54
            :....|.|.:|.|           |:||                 :..:::|:...::.||.::|
 Worm    10 LGAESILSMSELHKVANAKTKVDDYFAK-----------------RNELLEELSELENTEKFIKE 57

  Fly    55 YRKEMEHLLEEKMSHVEELRQIHADINDMENIIKQTKENQTRSFDMANRVYEEYLALKYQIDHMR 119
            ..|.::.|.:||..|.|.::.|:.|.:|:|   ::....:|...|..:::.:.|.||...|:...
 Worm    58 TAKTIDELNKEKEEHSEIIQLINQDKSDLE---REIAAAETEKKDRESKIVKRYEALLKLIESTN 119

  Fly   120 RDYLGLSPLRDLHEEEGSPI--SKDRFQTNFLKVAAQSAAAAAAAAAAAASVNQNSSLARPHARH 182
            ...          :|.|..|  |:|......||:..                             
 Worm   120 EKL----------KETGCDIALSQDDLPQTHLKIEP----------------------------- 145

  Fly   183 PLMPEATVTALPSGGGQGGVGGGGAAGGGGGSVGGGGGGGGNPGHAFMPPAPPGAGSAAAAAAAA 247
               |.|.||.:.|||                                :|...|............
 Worm   146 ---PAAPVTPVLSGG--------------------------------LPSPFPNFNFRNLFQPML 175

  Fly   248 AVRLGKGDFSAPPP---PPPPSNRLQQSPSIGIGHHPSFRSDFNVNLRQQPPPMKSCLSCHQQIH 309
            ..:||....::|.|   |||......|...:.:..|             |.||||:|.||:||||
 Worm   176 LEQLGSFSTNSPTPQFRPPPHMAAAMQHHQLKVTDH-------------QSPPMKTCQSCYQQIH 227

  Fly   310 RNAPICPLCKAKSRSRNPKKPKKKN 334
            |||||||:||:||||:||||||:|:
 Worm   228 RNAPICPMCKSKSRSKNPKKPKRKD 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13001NP_573181.1 zf-C4H2 20..325 CDD:287156 69/309 (22%)
vab-23NP_001022535.1 zf-C4H2 23..251 CDD:287156 79/334 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164148
Domainoid 1 1.000 117 1.000 Domainoid score I3712
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 118 1.000 Inparanoid score I3363
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1316216at2759
OrthoFinder 1 1.000 - - FOG0005393
OrthoInspector 1 1.000 - - oto20530
orthoMCL 1 0.900 - - OOG6_107194
Panther 1 1.100 - - LDO PTHR31058
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3959
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.020

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