DRSC/TRiP Functional Genomics Resources

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Protein Alignment wus and Csp

DIOPT Version :9

Sequence 1:NP_001285355.1 Gene:wus / 32683 FlyBaseID:FBgn0030805 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001287144.1 Gene:Csp / 40459 FlyBaseID:FBgn0004179 Length:249 Species:Drosophila melanogaster


Alignment Length:84 Identity:27/84 - (32%)
Similarity:45/84 - (53%) Gaps:20/84 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 YKVLGVSATASQAEITAAYRKLSKEYHPDKVKDEGLRAQAHQRFIEIQQAYSVLSKIKSNRRRKN 395
            |::||:..||:..:|...||||:.:|||||..|   ...|..:|.|:.:|:|:|    |::.::|
  Fly    19 YEILGLPKTATGDDIKKTYRKLALKYHPDKNPD---NVDAADKFKEVNRAHSIL----SDQTKRN 76

  Fly   396 -------------KQYQEE 401
                         :|:.||
  Fly    77 IYDNYGSLGLYIAEQFGEE 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wusNP_001285355.1 TM2 47..97 CDD:282945
DnaJ 327..>385 CDD:223560 21/53 (40%)
DnaJ 331..385 CDD:278647 21/53 (40%)
CspNP_001287144.1 DnaJ 17..>86 CDD:223560 24/73 (33%)
DnaJ 17..79 CDD:278647 24/66 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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