DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4928 and Unc93b1

DIOPT Version :9

Sequence 1:NP_573179.1 Gene:CG4928 / 32682 FlyBaseID:FBgn0027556 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001101983.1 Gene:Unc93b1 / 361689 RGDID:1311984 Length:630 Species:Rattus norvegicus


Alignment Length:635 Identity:136/635 - (21%)
Similarity:248/635 - (39%) Gaps:160/635 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AGFENDE-----------PVKPKAGFEPDTASLREKVVLNPGEKWRILKNISIISIAFMVQFTAF 60
            ||.:.||           |:....|..|:.....|:......::..::||:...|....:.:..:
  Rat    35 AGPQGDEDRLGVHDGPEAPLDELVGAYPNYNEEEEERRYYRRKRLGVVKNVLAASTGGTLTYGVY 99

  Fly    61 QGTANLQSSINAKD----------GLGTVS---LSAIYAALVVSCIFLPTLIIRKLTV------- 105
            .|...:|..::..:          ||..:.   |..|....:.:.::.|.||..|:.:       
  Rat   100 LGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPIAALLYTPVLIRPKVLMSLPLYRF 164

  Fly   106 ---KWTLVCSMLCYAPYIAFQLFPRFYTLVPAGILVGMGAAPMWASKATYLTQVGQVYAKITE-- 165
               ||.:..::..||.:::...:.|:|||||:.:.:||...|:|||...|:|::.|.|.:.:.  
  Rat   165 FGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMGNYITRMSQKYYEYSHYK 229

  Fly   166 -----------------------QAVDAIIVRFFGFFFLAWQSAELWGNLISSLVLSSGAHGGGS 207
                                   ||:      |:.||.|::..|:|  .::..|           
  Rat   230 EQDEQGPQQRPPRGSHAPYLLVFQAI------FYSFFHLSFACAQL--PMVYFL----------- 275

  Fly   208 SSNTTVSEEDLQFCGANFCTTGSGGHGN------LERPPEDEIFEISMIYLSCIVAAVCIIAFFL 266
              |..:.:.:........|.|.|.|..|      |...|...    ::|.:..::.||..:|..|
  Rat   276 --NHYLYDLNHTLFNVKSCGTKSYGILNGFNKTVLRTLPRSR----NLIVVESVLMAVAFLAMLL 334

  Fly   267 ---------DPLKRYGEKRKGSNSAAELSGLQLLSATFRQMKKPNLQLLIPITVFIGMEQAFIGA 322
                     .|.:....:..|..:..:|        .|:.::...|:.|:|..::.|.|..|...
  Rat   335 VLGLCGAAYRPTEEIDLRSVGWGNIFQL--------PFKHVRDFRLRHLVPFFIYSGFEVLFACT 391

  Fly   323 DFTQAYVACALGVNKIGFVMICFGVVNALCSILFGSVMKYIGRTPIIVLGAVVHFTLITVELFWR 387
            .||..|..|::|:.::.:::|.:.:..:..|:| |.:..::.|:..:|.||.:|..|.....||.
  Rat   392 GFTLGYGVCSMGLERLAYLLIAYSLGASAASVL-GLLGLWLPRSVPLVAGAGLHLLLTLSLFFWA 455

  Fly   388 PNP---DNPIIFYAMSGLWGVGDAVWQTQINGLYGLLF--RRNKEAAFSNYRLWESAGFVIAYAY 447
            |.|   .:..|||.::.|||||.|:.:|.::.|.|:|:  :..::..|:.|..|::....:.| .
  Rat   456 PAPRVLQHSWIFYFVAALWGVGSALNKTGLSTLLGILYEDKERQDFIFTIYHWWQAVAIFVVY-L 519

  Fly   448 ATTLCTQMKLYILLAVLTLGCIGYVIVE------ILYR-----KKQRKLKKQEKLE--------- 492
            .::|..:.||.:||..|......|:.:|      ::.|     |.|.|::....||         
  Rat   520 GSSLPMKAKLAVLLVTLVAAATSYLWMENKLQQGLVPRQPRIPKPQHKVRGYRYLEEDNSDESDV 584

  Fly   493 --------AAEKEKEAAAAAAAAALAAAEA-------------GADGVEE 521
                    .||:|     |..|..|.|..|             |.||.||
  Rat   585 EGEQGQGDCAEEE-----APQAGPLGAEPAGPCRRPCPYEQALGGDGPEE 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4928NP_573179.1 MFS 49..>155 CDD:328737 28/128 (22%)
MFS_1 <255..426 CDD:331686 46/184 (25%)
Unc93b1NP_001101983.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3097
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.