DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4928 and plep-1

DIOPT Version :9

Sequence 1:NP_573179.1 Gene:CG4928 / 32682 FlyBaseID:FBgn0027556 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001300605.1 Gene:plep-1 / 190188 WormBaseID:WBGene00021797 Length:456 Species:Caenorhabditis elegans


Alignment Length:511 Identity:112/511 - (21%)
Similarity:194/511 - (37%) Gaps:142/511 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 NISIISIAFMVQFTA-----------FQG--TANLQSSINAKDGLGTVSLSAIYAALVVSCIFLP 96
            |:..:|.:|::.|:|           |.|  .||: ..|.|:||.  :.|..:|....|||.|.|
 Worm    10 NMLRVSTSFLILFSAVLSHEFIAEPLFHGLSEANI-GGIQARDGY--LMLCILYFTNTVSCFFAP 71

  Fly    97 TLIIRKLTVKWTLVCSMLCYAPYIAFQLFPRFYTLVPAGILVGMGAAPMWASKATYLTQVGQVYA 161
             .::.:::.||.:|..|:......|..:||..|.|:....|.|.||..:|..:..|:|:      
 Worm    72 -FVVSRISGKWAMVLGMVAAFCMQAAYMFPNRYILMVTSALGGAGATLLWVGQGQYITE------ 129

  Fly   162 KITEQAVDAIIVRFFGFFFLAWQSAELWGNLISSLVLSSGAHGG--------GSSSNTTVSEEDL 218
            .|:|...:.             .::..||....||:.     ||        .||.:..|:...:
 Worm   130 NISEANREK-------------NTSIQWGFYKMSLIF-----GGVFFFFYFQNSSIDAIVANGQM 176

  Fly   219 QFCGANFCTTGSGGHGNLERPPEDEIFEISMIYLSCIVAAVCIIAFFLDPLKRYGEKRKGSNSAA 283
            |                        ||.|  ::::..|.:: |.:.||       .:.:.|.:.|
 Worm   177 Q------------------------IFFI--VFMTFTVLSI-INSIFL-------PQSQVSQNQA 207

  Fly   284 ELSGLQLLSATFRQMKKPNLQLLIPITVFIGMEQAFIGADFTQAYVAC-----ALGVN-----KI 338
            .|...:....:|:.:|.|.:........:.|:.::|    :...|.||     .|..|     .|
 Worm   208 ILPFCETFVNSFKLLKTPRMFCFTIFFFYTGLIRSF----WISIYPACIKFTSQLSTNTTAILTI 268

  Fly   339 GFVMI-CFGVVNALCSILFGSVMKYIGRTPIIVLGAVVHFTLITVELFWRPNPDNPI-------- 394
            |.::. |..|:.:|...:.|:.::..|:..:|:...::|..|..:.....|| |.|:        
 Worm   269 GMIVTGCGQVIGSLSVAVIGNKIRKFGQHTLILCALILHIFLCVMISLTFPN-DAPLGHTDKNGP 332

  Fly   395 IFYA-------MSGLWGVGDAVWQTQINGLYGLLFRRNKEAAFSNYRLWESAG-------FVIAY 445
            :|.|       :|.|.|.|||:.|||:.......::......||.:|.  |:|       |...|
 Worm   333 VFGASVLSAMTISALLGFGDAILQTQVYSYIAKYYQNESSTVFSIFRF--SSGIASTLLFFAAQY 395

  Fly   446 AYATTLCTQMKLYILLAVLTLGCIGYVIVEILYRKKQRKLKKQEKLEAAEKEKEAA 501
            .:   |...:.|..:.|||:    |..::..            :|..||..||:.|
 Worm   396 FH---LMHHLILIAIFAVLS----GLAVLRF------------QKSSAAVSEKQKA 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4928NP_573179.1 MFS 49..>155 CDD:328737 34/118 (29%)
MFS_1 <255..426 CDD:331686 42/196 (21%)
plep-1NP_001300605.1 UNC-93 14..170 CDD:114686 45/183 (25%)
MFS_1 54..388 CDD:284993 85/399 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54908
OrthoDB 1 1.010 - - D1145833at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.