DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4928 and unc-93

DIOPT Version :9

Sequence 1:NP_573179.1 Gene:CG4928 / 32682 FlyBaseID:FBgn0027556 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001021218.1 Gene:unc-93 / 175466 WormBaseID:WBGene00006822 Length:705 Species:Caenorhabditis elegans


Alignment Length:444 Identity:156/444 - (35%)
Similarity:256/444 - (57%) Gaps:19/444 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KWRILKNISIISIAFMVQFTAFQGTANLQSSINAKDGLGTVSLSAIYAALVVSCIFLPTLIIRKL 103
            |.:|:.|:.|:|:||:..||||.|..|||:|:|.  .||:.||.|:|.:|.:|.:|:|:.:|.:|
 Worm   243 KRKIMSNLWILSVAFLFLFTAFNGLQNLQTSVNG--DLGSDSLVALYLSLAISSLFVPSFMINRL 305

  Fly   104 TVKWTLVCSMLCYAPYIAFQLFPRFYTLVPAGILVGMGAAPMWASKATYLTQVGQVYAKITEQAV 168
            ..|.|.:.::..|..||...|.|.:.:::||.|..|:.|:.:|.:|..|:|::|..||.:..::.
 Worm   306 GCKLTFLIAIFVYFLYIVINLRPTYSSMIPASIFCGIAASCIWGAKCAYITEMGIRYASLNFESQ 370

  Fly   169 DAIIVRFFGFFFLAWQSAELWGNLISSLVLSSGAHGGGSSSNTTVSEEDLQF--CGANFCTTGSG 231
            ..:||||||:||:.....::.||::||.:.:.      |.|......||..:  ||..|....|.
 Worm   371 TTVIVRFFGYFFMIVHCGQVVGNMVSSYIFTL------SYSQALRGPEDSIYDSCGYQFPKNLSD 429

  Fly   232 ----GHGNLERPPEDEIFEISMIYLSCIVAAVCIIAFFLDPLKRYGEKRKGSNSAAELSGLQLLS 292
                ...||.|||:.....:.:.||:|::.:..|::.||:.|.:....||    .|:....::..
 Worm   430 LTELAESNLARPPQKVYVAVCLAYLACVIISGMIMSMFLNALAKDARNRK----MAQKFNSEIFY 490

  Fly   293 ATFRQMKKPNLQLLIPITVFIGMEQAFIGADFTQAYVACALGVNKIGFVMICFGVVNALCSILFG 357
            ...:.:......||:|:|:|.|:||||:...:|:|:|.|.||:.:|||||.|||:.:|:||::||
 Worm   491 LMLKHLINIKFMLLVPLTIFNGLEQAFLVGVYTKAFVGCGLGIWQIGFVMACFGISDAVCSLVFG 555

  Fly   358 SVMKYIGRTPIIVLGAVVHFTLITVELFWRPNPDNPIIFYAMSGLWGVGDAVWQTQINGLY-GLL 421
            .::|..||.|:.|.||||:..:|...:.|..|..:..|||.::.:||:.|.||.|||||.: .|:
 Worm   556 PLIKLFGRMPLFVFGAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQINGFWVALV 620

  Fly   422 FRRNKEAAFSNYRLWESAGFVIAYAYATTLCTQMKLYILLAVLTLGCIGYVIVE 475
            .|::.:.||:.||.|||.|..|.:|....:..::.|.|...:|.||..|::.:|
 Worm   621 GRQSLQFAFTKYRFWESLGIAIGFALIRHVTVEIYLLITFFMLLLGMCGFLAIE 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4928NP_573179.1 MFS 49..>155 CDD:328737 40/105 (38%)
MFS_1 <255..426 CDD:331686 63/171 (37%)
unc-93NP_001021218.1 MFS 250..673 CDD:119392 152/434 (35%)
MFS_1 250..643 CDD:284993 144/404 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158444
Domainoid 1 1.000 206 1.000 Domainoid score I1700
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10356
Inparanoid 1 1.050 295 1.000 Inparanoid score I1666
Isobase 1 0.950 - 0 Normalized mean entropy S4703
OMA 1 1.010 - - QHG54908
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003220
OrthoInspector 1 1.000 - - otm14398
orthoMCL 1 0.900 - - OOG6_103480
Panther 1 1.100 - - LDO PTHR19444
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2890
SonicParanoid 1 1.000 - - X2635
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.880

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