DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4928 and unc93a.2

DIOPT Version :9

Sequence 1:NP_573179.1 Gene:CG4928 / 32682 FlyBaseID:FBgn0027556 Length:538 Species:Drosophila melanogaster
Sequence 2:XP_002931523.1 Gene:unc93a.2 / 100170165 XenbaseID:XB-GENE-5800507 Length:460 Species:Xenopus tropicalis


Alignment Length:444 Identity:195/444 - (43%)
Similarity:287/444 - (64%) Gaps:10/444 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LKNISIISIAFMVQFTAFQGTANLQSSINAKDGLGTVSLSAIYAALVVSCIFLPTLIIRKLTVKW 107
            :|||.|:|..|::.||||.|..:||||:|:.:|||..|||.||.||::|.:|:|:::|:|:..||
 Frog     4 IKNILIVSFGFLLLFTAFGGLQSLQSSLNSDEGLGVASLSVIYGALIISSVFVPSILIKKIGCKW 68

  Fly   108 TLVCSMLCYAPYIAFQLFPRFYTLVPAGILVGMGAAPMWASKATYLTQVGQVYAKITEQAVDAII 172
            |:|.||.||..|.....:..:|||:|..:::|.|.||:||:|.||||:.|..||:...:....|:
 Frog    69 TIVASMCCYITYSLGNFYASWYTLIPTSLILGFGGAPLWAAKCTYLTESGNRYAEKKGKLAKDIV 133

  Fly   173 VRFFGFFFLAWQSAELWGNLISSLVLSSGAHGGGSSSNTTVSEEDLQFCGANFCTTGSGGHGNLE 237
            .::||.|||.:||:.:||||||||:....:..|.::     |..|...||||.|...:.|:|...
 Frog   134 NQYFGLFFLIFQSSGVWGNLISSLIFGQDSPAGSNN-----SFPDYSHCGANDCPGSNFGNGTGS 193

  Fly   238 -RPPEDEIFEISMIYLSCIVAAVCIIAFFLDPLK-RYGEKRKGSNSAAELSGLQLLSATFRQMKK 300
             :|.:..|:.:..:|....|.||.:||.|||.:. |..:.:.|:.   |.|.::.:.||.|.:|.
 Frog   194 IKPTQSLIYTLLGVYTGSGVLAVILIAVFLDTINLRTDQLKPGTK---EESFIKKILATIRHLKD 255

  Fly   301 PNLQLLIPITVFIGMEQAFIGADFTQAYVACALGVNKIGFVMICFGVVNALCSILFGSVMKYIGR 365
            ....||||:|::.|.||.|:..|:|::||.|:||::.:|:|||||...||:||:|||.:.||.||
 Frog   256 KRQCLLIPLTMYSGFEQGFLAGDYTKSYVTCSLGIHFVGYVMICFAATNAVCSLLFGQLSKYTGR 320

  Fly   366 TPIIVLGAVVHFTLITVELFWRPNPDNPIIFYAMSGLWGVGDAVWQTQINGLYGLLFRRNKEAAF 430
            ..:.::.||::...|...|.|:|:|::..:|:....:||:.|||||||.|.|||:||..:|||||
 Frog   321 IFLFIMAAVLNAASIIALLLWQPHPNDFAVFFIFPAIWGIADAVWQTQTNALYGVLFDEHKEAAF 385

  Fly   431 SNYRLWESAGFVIAYAYATTLCTQMKLYILLAVLTLGCIGYVIVEILYRKKQRK 484
            :|||||||.||||||.|:|.||..:|||||||||.:..:.|..||.|...:.:|
 Frog   386 ANYRLWESLGFVIAYGYSTFLCVSIKLYILLAVLLIAIVLYGCVEYLEYVEHKK 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4928NP_573179.1 MFS 49..>155 CDD:328737 50/105 (48%)
MFS_1 <255..426 CDD:331686 72/171 (42%)
unc93a.2XP_002931523.1 MFS_unc93A_like 7..434 CDD:340964 192/434 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 268 1.000 Domainoid score I1831
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10356
Inparanoid 1 1.050 394 1.000 Inparanoid score I1926
OMA 1 1.010 - - QHG54908
OrthoDB 1 1.010 - - D1145833at2759
OrthoFinder 1 1.000 - - FOG0003220
OrthoInspector 1 1.000 - - otm49345
Panther 1 1.100 - - O PTHR19444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2635
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.080

Return to query results.
Submit another query.