DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13002 and CheB42a

DIOPT Version :10

Sequence 1:NP_573178.1 Gene:CG13002 / 32681 FlyBaseID:FBgn0030804 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_995765.1 Gene:CheB42a / 2768721 FlyBaseID:FBgn0053348 Length:198 Species:Drosophila melanogaster


Alignment Length:167 Identity:39/167 - (23%)
Similarity:71/167 - (42%) Gaps:18/167 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 STTYEILGDDRILDIVCDAAEDRGN-TPIRQILDISGLTVDMAADLETLYFNGDIKVL-IDV-PN 101
            :|.|::..|...|...|:  ...|| :....::|.|.|.|....  ..:...|:.||: .|| |.
  Fly    19 ATEYQLTLDKDGLLAPCE--NQPGNPSGFEAMVDTSSLKVHNLG--SKVRIEGEQKVVWKDVQPG 79

  Fly   102 NPMAMEVDVFRWERSEWIPTTLAMKRDSFCMSLSNPMELWYPIFLKV------PKEEMICPPKKG 160
            :.:.:...|:|.::..|..|......::||.::.:..:.||..:.|.      .||:.:..|  |
  Fly    80 DTLKVFGQVYRLDKGTWQKTMFTASSNNFCKNMFDKNQYWYNFWTKYISNSDEIKEKCLTTP--G 142

  Fly   161 HVYRLANVSNHVFVR-NMPYANIAGDAKAVVHLTSGD 196
            .|.:..:....:... |:|  |:.|..|.||.:.:.|
  Fly   143 AVLKYKDYELDLKTSLNVP--NLDGRYKLVVQIEAFD 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13002NP_573178.1 DM11 41..202 CDD:128920 39/166 (23%)
CheB42aNP_995765.1 DM11 20..183 CDD:128920 39/166 (23%)

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