DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4880 and Tor1b

DIOPT Version :10

Sequence 1:NP_573177.1 Gene:CG4880 / 32680 FlyBaseID:FBgn0030803 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001034286.1 Gene:Tor1b / 311854 RGDID:1308431 Length:336 Species:Rattus norvegicus


Alignment Length:333 Identity:60/333 - (18%)
Similarity:121/333 - (36%) Gaps:82/333 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 WAYLILALAA-----GIGMLLQFTDKLSTVSGFLESYKNQYHSIVHNQDNYCNPSRRLGD--MVL 122
            |..|...:||     .:|:.:   ..:|.::|:| ||.:.|....    ..|:..|.|..  :.|
  Rat    14 WVLLAAHVAAAFEPVSVGIAI---GAVSALTGYL-SYSDFYCRFT----ECCHEERPLNTSALKL 70

  Fly   123 HARHQVLNQDLALNQLELALDNTTNE-------AIVLVGTSGVGKSHTARILRETFPWPEN---- 176
            ....::..|.||...:..||....|.       .:.|.|.:|.||:..::|:.|.. :|:.    
  Rat    71 DLEEKLFGQHLATEVILKALTGFRNNKNPKKPLTLSLHGWAGTGKNFVSQIVAENL-YPKGLKSN 134

  Fly   177 -----VNTLSWTGSSSLGRVKSML-----SGLTYCGQNMILIDNMTPKDAHFVPIINEMISEGEK 231
                 |:||.:.....:...:..|     ..::.||.::.:.|.|.......:..|...:...|:
  Rat   135 FVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACGSSVFIFDEMDKLHPGIIDAIKPFLDYYEQ 199

  Fly   232 SANHTEHPQQKRLTIVFIFNV-------------NSMQPGEEFEM-DME-ILR----NMPHTQL- 276
                .:....::...:|:.|.             .:.:..||.:: |:| :|.    |..|:.| 
  Rat   200 ----VDGISYRKAIFIFLSNAGGDLITKTTLDFWRAGRKREEIQLKDLEPVLSVGVFNNKHSGLW 260

  Fly   277 -------------VTFATLDPTHLVDCIRREAAIAMVHLEDEHVEEIIKSID--------ASASG 320
                         :.|..|:..|:..|:|.|.......::::.|..:...:.        .|..|
  Rat   261 HSGLIDKNLIDYFIPFLPLEYKHVKMCVRAEMRARGAAVDEDIVTSVADEMTFFPKDEKIYSDKG 325

  Fly   321 CKSILAKV 328
            ||::.:::
  Rat   326 CKTVQSRL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4880NP_573177.1 P-loop containing Nucleoside Triphosphate Hydrolases 131..>181 CDD:476819 16/65 (25%)
Tor1bNP_001034286.1 P-loop containing Nucleoside Triphosphate Hydrolases 62..176 CDD:476819 22/114 (19%)

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