DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4880 and Tor1b

DIOPT Version :10

Sequence 1:NP_573177.1 Gene:CG4880 / 32680 FlyBaseID:FBgn0030803 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_598434.2 Gene:Tor1b / 30934 MGIID:1353605 Length:336 Species:Mus musculus


Alignment Length:334 Identity:63/334 - (18%)
Similarity:123/334 - (36%) Gaps:84/334 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 WAYLILALAAG------IGMLLQFTDKLSTVSGFLESYKNQYHSIVHNQDNYCNPSRRLGD--MV 121
            || |:.|..||      :|:.:   ..:|.::|:| ||.:.|....    ..|:..|.|..  :.
Mouse    14 WA-LLAAHVAGAFEPVSVGIAI---GAVSALTGYL-SYTDFYCRFT----ECCHEERPLNTSALK 69

  Fly   122 LHARHQVLNQDLALNQLELALDNTTNE-------AIVLVGTSGVGKSHTARILRETFPWPEN--- 176
            |....::..|.||...:..||....|.       .:.|.|.:|.||:..::|:.|.. :|:.   
Mouse    70 LDLEEKLFGQHLATEVILKALTGFRNNKNSKKPLTLSLHGWAGTGKNFISQIVAENL-YPKGLKS 133

  Fly   177 ------VNTLSWTGSSSLGRVKSML-----SGLTYCGQNMILIDNMTPKDAHFVPIINEMISEGE 230
                  |:||.:.....:...:..|     ..::.||.::.:.|.|.......:..|...:...|
Mouse   134 NFVHLFVSTLHFPHEQKIKVYQDQLQKWIRGNVSACGSSVFIFDEMDKLHPGIIDAIKPFLDYYE 198

  Fly   231 KSANHTEHPQQKRLTIVFIFNV-------------NSMQPGEEFEM-DME-ILR----NMPHTQL 276
            :    .:....:|...:|:.|.             .:.:..||.:: |:| :|.    |..|:.|
Mouse   199 Q----VDGISYRRAIFIFLSNAGGDLITKTALDFWRAGRKREEIQLKDLEPVLSVGVFNNKHSGL 259

  Fly   277 --------------VTFATLDPTHLVDCIRREAAIAMVHLEDEHVEEIIKSID--------ASAS 319
                          :.|..|:..|:..|:|.|.......::::.|..:...:.        .|..
Mouse   260 WHSGLIDKNLIDYFIPFLPLEYKHVKMCVRAEMRARGAAVDEDVVTSVADEMTFFPKDEKIYSDK 324

  Fly   320 GCKSILAKV 328
            |||::.:::
Mouse   325 GCKTVQSRL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4880NP_573177.1 P-loop containing Nucleoside Triphosphate Hydrolases 131..>181 CDD:476819 16/65 (25%)
Tor1bNP_598434.2 P-loop containing Nucleoside Triphosphate Hydrolases 62..176 CDD:476819 22/114 (19%)
ClpA <172..310 CDD:440308 22/141 (16%)

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