DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4880 and Tor3a

DIOPT Version :10

Sequence 1:NP_573177.1 Gene:CG4880 / 32680 FlyBaseID:FBgn0030803 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001009683.1 Gene:Tor3a / 304884 RGDID:1310101 Length:395 Species:Rattus norvegicus


Alignment Length:300 Identity:59/300 - (19%)
Similarity:96/300 - (32%) Gaps:110/300 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 LHARH-------QVLNQDLALNQLELALDNTTNEAIVLVGTSGVGKSHTARILRET--------- 170
            ||.:|       :.:...|.:.|:..||      |:...|.||.||:..||:|.:.         
  Rat   132 LHGQHLASKLVLEAVKGYLEMPQVGKAL------ALSFHGWSGTGKNFVARMLVDNLYRDGMRSD 190

  Fly   171 ----------FPWPENVNTLSWTGSSSLGRVKSMLSGLTYCGQNMILIDN--------------- 210
                      ||.|:.|:..    ...|.|  .|......|.|:..:.|.               
  Rat   191 CVKMFISTFHFPHPKYVDLY----KEDLQR--QMQETQRRCQQSTFVFDEAEKLHPGLLELLEPY 249

  Fly   211 MTPKD----------AHFV-------PIINEMI--------SEGEKSANHTEHPQQKRLTIVFIF 250
            :.|:.          |.|:       .:|||::        |..|.:..|.|.|.|..:      
  Rat   250 LEPRSPETHGAELPRAIFLLLSNLGGSVINEVVLGLLKAGWSREEITLQHLEMPLQAEI------ 308

  Fly   251 NVNSMQPGEEFEMDMEILRNMPHTQLVTFATLDPTHLVDCIRREAAIAMVHLEDEHVEEIIKSID 315
                ::..:.......:|:.......:.|..|:..|:..|:|.......:...:|.::||.|.:.
  Rat   309 ----IKSADSSFGSSRLLKKHLIDLFIPFLPLEYRHVRLCVRDAFLGQDLPYTEEALDEIAKMMT 369

  Fly   316 --------ASASGCKSILAKVLLYGKPIIADSQDTDQVLP 347
                    .|:.|||||              ||..:.|||
  Rat   370 YVPEEEQLFSSQGCKSI--------------SQRINLVLP 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4880NP_573177.1 P-loop containing Nucleoside Triphosphate Hydrolases 131..>181 CDD:476819 17/68 (25%)
Tor3aNP_001009683.1 Torsin 113..232 CDD:399367 25/111 (23%)

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