DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4880 and tor-2

DIOPT Version :10

Sequence 1:NP_573177.1 Gene:CG4880 / 32680 FlyBaseID:FBgn0030803 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_502683.2 Gene:tor-2 / 189606 WormBaseID:WBGene00006598 Length:310 Species:Caenorhabditis elegans


Alignment Length:295 Identity:50/295 - (16%)
Similarity:97/295 - (32%) Gaps:92/295 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 YHSIVHNQDNYCNPSRRLGDMVLHARHQVLNQDLALNQLELALDNTTNEAIVLVGTSGVGKSHTA 164
            ||::..:.||.......:.:.|:|:.....:.:.:...|.|:..          |.:|.||::..
 Worm    19 YHALYKDFDNKIFGQHLMAESVVHSIKSHWHNEHSQKPLVLSFH----------GGTGTGKNYVT 73

  Fly   165 RILRET-------------FPWPENVNTLSWTGSSSLGRVKSMLSGLTYCGQNMILIDNMTPKDA 216
            .|:...             |....|.....:.....|.....::.....|.:::.:.|......:
 Worm    74 EIIVNNTYRSGMHSPFVNYFVATNNFPNKKYIEDYKLELKDQLIRSARRCQRSIFIFDETDKLQS 138

  Fly   217 HFVPIINEMI--------------------SEGEKS-AN-HTEHPQQKRLTIVFIFNVNSMQPGE 259
            ..:.:|...:                    ::|.|. || ..||.:..:        :.|....:
 Worm   139 ELIQVIKPFLDYYPAVFGVDFRKTIFIFLSNKGSKEIANIALEHHENGK--------IRSQLELK 195

  Fly   260 EFEMDMEI--------LRN--MPHTQL----VTFATLDPTHLVDCIRREAAIAMVHL-------- 302
            .||..:.:        |||  |...||    :.|..|...::..||:       |||        
 Worm   196 HFERTLMLSAFNEEGGLRNTDMISNQLIDHFIPFLPLSKFYVSQCIQ-------VHLRKRGRHDL 253

  Fly   303 --EDEHVEEIIKSID--------ASASGCKSILAK 327
              :.|.::.::.|::        .|:||||.:.||
 Worm   254 AKDGEFMQRVLDSLEFFPESSKIFSSSGCKRVNAK 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4880NP_573177.1 P-loop containing Nucleoside Triphosphate Hydrolases 131..>181 CDD:476819 9/62 (15%)
tor-2NP_502683.2 Torsin 12..130 CDD:399367 17/120 (14%)
ClpA <157..234 CDD:440308 17/84 (20%)

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