DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4880 and ooc-5

DIOPT Version :10

Sequence 1:NP_573177.1 Gene:CG4880 / 32680 FlyBaseID:FBgn0030803 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_495916.1 Gene:ooc-5 / 174433 WormBaseID:WBGene00003870 Length:356 Species:Caenorhabditis elegans


Alignment Length:343 Identity:71/343 - (20%)
Similarity:116/343 - (33%) Gaps:85/343 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 CKHHLDIAHCTQKKAPWRNWAYLILALAAGIGMLL--QFTDKLSTVSGFLESYKNQ--------- 99
            |.|..|:           |:.|  ..|.|.|..||  |...|...|:.....:.|:         
 Worm    56 CCHEPDV-----------NFNY--HTLDADIANLLFGQHLVKDVVVNSIKSHWYNENPRKPLVLS 107

  Fly   100 YHSIVHNQDNY-----CNPSRRLGDMVLHARHQVLNQDLA-LNQLELALDNTTNEAIVLVGTSGV 158
            :|....:..||     .|.:.|||......:|.|...|.. .|:||.......|..:..|...  
 Worm   108 FHGYTGSGKNYVAEIIANNTFRLGLRSTFVQHIVATNDFPDKNKLEEYQVELRNRILTTVQKC-- 170

  Fly   159 GKSHTARILRETFPWPENVNTLSWTGSSSLGRVK------SMLSGLTYCGQNMILIDNMTPKDAH 217
              ..:..|..|....||.:          ||.:|      |.:||:.:.....||:.|  .....
 Worm   171 --QRSIFIFDEADKLPEQL----------LGAIKPFLDYYSTISGVDFRRSIFILLSN--KGGGE 221

  Fly   218 FVPIINEMISEGEKSANHTEHPQQKRLTIVFIFNVNSMQPGEEFEMDM-EILRNMPHTQLVTFAT 281
            ...|..|....|        :|:::.....|...:.:....|:..:.| |::.|......|.|..
 Worm   222 IARITKEQYESG--------YPREQLRLEAFERELMNFSYNEKGGLQMSELISNHLIDHFVPFLP 278

  Fly   282 LDPTHLVDCI----RREAAIAMVHLEDEHVEEIIKSID--------ASASGCKSI-------LAK 327
            |...|:..|:    |:.....:|...| .||.::.|:.        .|:||||.:       :||
 Worm   279 LQREHVRSCVGAYLRKRGRGDLVSNVD-FVERVLNSLQYFPESSKAFSSSGCKRVDAKTDLEMAK 342

  Fly   328 VLLYGKPIIADSQDTDQV 345
            :    :|:::.....|::
 Worm   343 I----RPLLSSVHFDDEL 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4880NP_573177.1 P-loop containing Nucleoside Triphosphate Hydrolases 131..>181 CDD:476819 10/50 (20%)
ooc-5NP_495916.1 Torsin 58..177 CDD:399367 28/135 (21%)

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