Protein Alignment Rcp and AT5G62950

DIOPT Version :9

• Sequence 1: NP_573175.2
• Gene: Rcp / 32678
• FlyBaseID: FBgn0030801
• Length: 238
• Species: Drosophila melanogaster
• Sequence 2: NP_001190602.1
• Gene: AT5G62950 / 836415
• AraportID: AT5G62950
• Length: 139
• Species: Arabidopsis thaliana
• Alignment Length: 117
• Identity: 34/117 - (29%)
• Similarity: 56/117 - (47%)
• Gaps: 11/117 - (9%)

  Fly     1 METINPTFSYLTNLEVMQILQKIKSTKKKFGMRNLATVT---YEALQYLEESPCKTQTRENIMNY 62
            |:.:......|||.||:..|....::|..  .|.:|.:.   |:...||.|:...|||||:|..:
plant     1 MKIVKANAGALTNFEVLDFLNSRGASKDT--TRVIAPIARSEYKVYDYLVETAASTQTRESINKF 63

  Fly    63 VKDLSSYRLKSQEILQMINDPPTSALHTQLLIDDNKAPLTDEE--NEKIIQL 112
            ......::|...|||.:||..|:|.:....:|::    |.|.|  .:.|::|
plant    64 ADKCKDFKLAKAEILNIINLRPSSIVELLPIIEN----LDDREIDTDGILEL 111

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcp	NP_573175.2	RNA_pol_Rpb4	10..112	CDD:281819	32/106 (30%)
AT5G62950	NP_001190602.1	RPOL4c	4..122	CDD:128904	33/114 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	44	1.000	Domainoid score	I4697
eggNOG	1	0.900	-	-		E1_KOG4168
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1634280at2759
OrthoFinder	1	1.000	-	-		FOG0004828
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_103530
Panther	1	1.100	-	-	LDO	PTHR15561
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	9	8.780