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Protein Alignment Rcp and AT3G28956
DIOPT Version :9
Sequence 1: | NP_573175.2 |
Gene: | Rcp / 32678 |
FlyBaseID: | FBgn0030801 |
Length: | 238 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001325904.1 |
Gene: | AT3G28956 / 822534 |
AraportID: | AT3G28956 |
Length: | 140 |
Species: | Arabidopsis thaliana |
Alignment Length: | 155 |
Identity: | 39/155 - (25%) |
Similarity: | 66/155 - (42%) |
Gaps: | 25/155 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 METINPTFSYLTNLEVMQILQKIKSTKKKFGMRNLATVT---YEALQYLEESPCKTQTRENIMNY 62
|:.:......|||.|::..|....::|.. .|.:|.:. |:...||.|:...|||||::...
plant 1 MKIMKANAGALTNFELLDFLNSRGASKDT--TRVIAPIARSEYKVYDYLVETAASTQTRESVNKS 63
Fly 63 VKDLSSYRLKSQEILQMINDPPTSALHTQLLIDDNKAPLTDEE--NEKIIQLSYKHFHGGETKG- 124
......::|...|||.:||..|:|.:....:|:: |.|.| .:.|::| .|.
plant 64 ADKCKDFKLAKAEILNIINLWPSSIVELLPIIEN----LDDREIDTDGILEL---------VKDL 115
Fly 125 ----AAKETPAEKPAESTAKAGKQS 145
...|:|.:...|...:.|:||
plant 116 LPPLPTAESPKDNDEEEETENGEQS 140
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Rcp | NP_573175.2 |
RNA_pol_Rpb4 |
10..112 |
CDD:281819 |
30/106 (28%) |
AT3G28956 | NP_001325904.1 |
None |
Information from Original Tools:
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