Protein Alignment Rcp and crcp

DIOPT Version :9

• Sequence 1: NP_573175.2
• Gene: Rcp / 32678
• FlyBaseID: FBgn0030801
• Length: 238
• Species: Drosophila melanogaster
• Sequence 2: XP_012812426.1
• Gene: crcp / 549232
• XenbaseID: XB-GENE-987451
• Length: 165
• Species: Xenopus tropicalis
• Alignment Length: 100
• Identity: 32/100 - (32%)
• Similarity: 55/100 - (55%)
• Gaps: 7/100 - (7%)

  Fly     1 METINPTFSYLTNLEVMQILQKIKS-------TKKKFGMRNLATVTYEALQYLEESPCKTQTREN 58
            ||..:...:.|:|.||..:|.::|:       .|...|.:||.|:.||.|:||..|||..|:.|.
 Frog     1 MEVKDANAALLSNYEVFHLLTELKAKQREVRKNKNSVGQQNLNTIMYETLKYLSSSPCHYQSPEI 65

  Fly    59 IMNYVKDLSSYRLKSQEILQMINDPPTSALHTQLL 93
            :..::..:..::|...|.||::|..|::|:..||:
 Frog    66 VREFLTAIKGHKLTKAEKLQLLNHRPSTAVEIQLV 100

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcp	NP_573175.2	RNA_pol_Rpb4	10..112	CDD:281819	30/90 (33%)
crcp	XP_012812426.1	RNA_pol_Rpb4	10..>100	CDD:281819	29/89 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	60	1.000	Domainoid score	I10443
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H40587
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1634280at2759
OrthoFinder	1	1.000	-	-		FOG0004828
OrthoInspector	1	1.000	-	-		oto104042
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	5.010