Protein Alignment Rcp and Crcp

DIOPT Version :9

• Sequence 1: NP_573175.2
• Gene: Rcp / 32678
• FlyBaseID: FBgn0030801
• Length: 238
• Species: Drosophila melanogaster
• Sequence 2: NP_446122.1
• Gene: Crcp / 114205
• RGDID: 620753
• Length: 148
• Species: Rattus norvegicus
• Alignment Length: 148
• Identity: 42/148 - (28%)
• Similarity: 78/148 - (52%)
• Gaps: 13/148 - (8%)

  Fly     1 METINPTFSYLTNLEVMQILQKIKSTKKK-------FGMRNLATVTYEALQYLEESPCKTQTREN 58
            ||..:...:.|:|.||.|:|..:|..:|:       .|.:||..:|||.|:|:.::|||.|:...
  Rat     1 MEVKDANAALLSNYEVFQLLTDLKEQRKESGKNKHSAGQQNLNAITYETLKYISKTPCKNQSPAI 65

  Fly    59 IMNYVKDLSSYRLKSQEILQMINDPPTSALHTQLLIDDNKAPLTDEENEKIIQLSYKHFHGGETK 123
            :..::..:.|::|...|.||::|..|.:|:..||::::::..||:|:.|.::.........|...
  Rat    66 VQEFLTAMKSHKLTKAEKLQLLNHRPMTAVEIQLMVEESEERLTEEQIEALLHTVTSILPAGPED 130

  Fly   124 GAAKET------PAEKPA 135
            ..:|.|      ..|:||
  Rat   131 EQSKSTSNDAAMEEEEPA 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rcp	NP_573175.2	RNA_pol_Rpb4	10..112	CDD:281819	34/108 (31%)
Crcp	NP_446122.1	RPOL4c	1..126	CDD:128904	36/124 (29%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	124..148		4/23 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166348823
Domainoid	1	1.000	74	1.000	Domainoid score	I8948
eggNOG	1	0.900	-	-		E1_KOG4168
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H40587
Inparanoid	1	1.050	77	1.000	Inparanoid score	I5156
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1634280at2759
OrthoFinder	1	1.000	-	-		FOG0004828
OrthoInspector	1	1.000	-	-		oto97361
orthoMCL	1	0.900	-	-		OOG6_103530
Panther	1	1.100	-	-	LDO	PTHR15561
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	14	13.760