DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4872 and Crym

DIOPT Version :9

Sequence 1:NP_573173.2 Gene:CG4872 / 32676 FlyBaseID:FBgn0030799 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_446407.1 Gene:Crym / 117024 RGDID:620943 Length:313 Species:Rattus norvegicus


Alignment Length:348 Identity:114/348 - (32%)
Similarity:166/348 - (47%) Gaps:52/348 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PAYYNADAVRQVL-TWPLVNKAVESALVAIVKQNPETPSTSFAFQPKRTFIPCGKEPGKVLLTMP 69
            ||:.:||.|:..| :..|:...:|:|| |...:.|:    ....||.||.:|..|..| .|..||
  Rat     5 PAFLSADEVQDHLRSSSLLIPPLEAAL-ANFSKGPD----GGVMQPVRTVVPVAKHRG-FLGVMP 63

  Fly    70 AYVGNYRLESSRDPGEVEHTHSTLACKLVTSFSGNPRRDPPLPSIHAHVLLFDNQTGQLSAIMEG 134
            ||      .::.|         .|..||||.:.|:...  .:||..|.|||||...|.|.|:|:|
  Rat    64 AY------SAAED---------ALTTKLVTFYEGHSNN--AVPSHQASVLLFDPSNGSLLAVMDG 111

  Fly   135 TDLTTWRTVSASLVATKYLYFRRFGAQAEQERNINVAIVGCGVQGQLHAAAFCANFRVRQLNLYN 199
            ..:|..||.:.|.:|||:|  :..|:..       :.|:|.|||...|...|...|..:::.::|
  Rat   112 NVITAKRTAAVSAIATKFL--KPPGSDV-------LCILGAGVQAYSHYEIFTEQFSFKEVRMWN 167

  Fly   200 RTQAKALGLADQLRQKLNTESGTQITVCPSPHEACQDADIICIATYSKEPLIQLADLKSKRAVHI 264
            ||:..|        :|..:.....:.||.|..||...||:|...|.:.||:  |.....|...||
  Rat   168 RTRENA--------EKFASSVQGDVRVCSSVQEAVTGADVIITVTMATEPI--LFGEWVKPGAHI 222

  Fly   265 NAVGAGEVHFSEVAPKIYQQAKVYVDCYANAEAE-----LVGLPAPITAEVGQIILDGNYPKELE 324
            |||||....:.|:..::.:||.:|||....|..|     |.|  |.|.||:|::: .|..|...|
  Rat   223 NAVGASRPDWRELDDELMKQAVLYVDSREAALKESGDVLLSG--ADIFAELGEVV-SGAKPAYCE 284

  Fly   325 -ISIFQSMGMASEDACVAQAVQD 346
             .::|:|:|||.||...|:.|.|
  Rat   285 KTTVFKSLGMAVEDLVAAKLVYD 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4872NP_573173.2 NADB_Rossmann 5..298 CDD:304358 93/292 (32%)
OCDMu 8..344 CDD:225280 110/342 (32%)
CrymNP_446407.1 OCD_Mu_crystall 5..312 CDD:280565 114/348 (33%)
NADB_Rossmann 40..307 CDD:304358 101/306 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347751
Domainoid 1 1.000 113 1.000 Domainoid score I6009
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1424
Inparanoid 1 1.050 124 1.000 Inparanoid score I4626
OMA 1 1.010 - - QHG60929
OrthoDB 1 1.010 - - D1345495at2759
OrthoFinder 1 1.000 - - FOG0006383
OrthoInspector 1 1.000 - - oto97284
orthoMCL 1 0.900 - - OOG6_102950
Panther 1 1.100 - - LDO PTHR13812
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.910

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