DRSC/TRiP Functional Genomics Resources

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Protein Alignment RSG7 and grid2ip

DIOPT Version :10

Sequence 1:NP_523380.2 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_012826769.3 Gene:grid2ip / 780069 XenbaseID:XB-GENE-981804 Length:1275 Species:Xenopus tropicalis


Alignment Length:713 Identity:117/713 - (16%)
Similarity:208/713 - (29%) Gaps:249/713 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KTQATNASSTAAPA--------------KTDCTSSNSSDPLAVAIPEPQSATAVVGGGAGGAAPG 60
            |..|..|...|.|.              .:......|||..:.|..||......|..|...|..|
 Frog   560 KAAAVEAEMVAPPRGSVHGLTSYQSIIHSSGTEDGRSSDSSSGAPCEPVEIAPRVTSGERQAGDG 624

  Fly    61 TATP-SPTPLANGS----------NNGTGSSVSPAATGTGAVATAA------------------- 95
            |:.| :|.|....:          ||..|...|..:.|:..::..|                   
 Frog   625 TSLPETPNPKMMSAVYAELENRFLNNFQGKVSSMKSHGSCNLSQRAGRGQRRLAQGPLWQRTGPP 689

  Fly    96 SAPAAAGTTSASPPASNPTTASTS-TASVVGAKTAAATTTSSSSATSSST---AAAGSKQSGS-- 154
            |.|......||..|:|:.:....| ..|:..:.:.....|.|.::.|..|   ..|.|:|.|.  
 Frog   690 SEPCPPRPPSAPSPSSSESNPYVSLDGSLPSSPSHRKIFTFSRASRSRDTDRFLDALSRQLGQNL 754

  Fly   155 --SGGLLTVSGNHHHHHHAHPQQ-------SAAGQSAA----------------------QPPQP 188
              :...:|...::........|.       |.|.:||:                      .||.|
 Frog   755 TFTDQFMTPENDYEEMSFQDDQYSCATRDISTASESASSSEDGSSLTYSSVSDLVPPPPHSPPPP 819

  Fly   189 PTATALAVPSASHHQRGG------KNEDAPNILVYKKMEAI------------------------ 223
            |.      ||..|..||.      ::..|||..:..|..:.                        
 Frog   820 PP------PSQPHPSRGDIKPPPEESNAAPNSFMRSKKSSANPLPPAPPPLPNPLIPPAPPLAPL 878

  Fly   224 ---------------IEKMQAESTGVAVRTVKAFMSKVPSVFTGADLVAWILKNFDVEDVTEALH 273
                           :::::.|....:..|:...:.:.......:|:|    |..|:|     ||
 Frog   879 THRNMHRRSDSSHMSVKRLRWEQVENSEGTIWGQLGEDSDYEKLSDMV----KYLDLE-----LH 934

  Fly   274 FAHLLSSHGYIFPIDDHALTVKNDGTFYRFQTPYFWPSNCWEPENTDYAVYLCKRTMQNKTRLEL 338
            |                       ||    |.|...|              :...:|:.|..:|:
 Frog   935 F-----------------------GT----QKPSLLP--------------VLPESMKKKGAVEI 958

  Fly   339 ADY-EAENLAKL---QKMFSRKWEFIFMQAESQSKVAKKRDKLERKVLDSQERAFWDVHRPMPGC 399
            ..: :|.|.|.|   .|:...:...|.|..|::........:|.....|.:||..::.:...|..
 Frog   959 LSHKKAYNTAILIAHLKLTPSELRHILMIMENERLEPSHIKQLLLFAPDEEERQQFEAYMGSPNK 1023

  Fly   400 VNTTEIDIKKAYRRGGSSHGTGSAGASLAKNPVEQLTRIIALRKQKLERRTIKVSKAAEALVAYY 464
            ::..:                 .....:...|..::.....|.|..|:.:|.::..:.:.::.  
 Frog  1024 LSEPD-----------------QFALQMMSVPEYKMRLRSLLFKSTLQEKTEEIRASCDCILK-- 1069

  Fly   465 DQYNEFDYFITSPELPNPWQTDSTEMWDTEKNSKEVPVRRVKRWAFSLRELLNDAIGREQFTKFL 529
                      .|.||               ||||:  :.::..:..::...|||...:...|   
 Frog  1070 ----------ASSEL---------------KNSKK--LAKILEFVLAMGNYLNDGQPKTNRT--- 1104

  Fly   530 EKEYSGENLKFWESVQEMKALPQS-----EIKEAIQKIWQEFLA-----PEAPCPVNVDSKSV 582
                :|..:.|...:...|.:...     .:.:::.:.:.|.|:     |..|....|:.:||
 Frog  1105 ----TGFKINFLTELNTTKTVDGKFTFLHILAKSLSQHFPELLSFAKDLPTVPLAAKVNQRSV 1163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RSG7NP_523380.2 DEP_RGS7-like 222..309 CDD:239897 14/125 (11%)
RGS_DHEX 306..407 CDD:375589 18/104 (17%)
GGL 432..493 CDD:128520 7/60 (12%)
RGS_R7-like 504..627 CDD:188660 14/89 (16%)
grid2ipXP_012826769.3 PDZ1_L-delphilin-like 42..117 CDD:467225
degP_htrA_DO <53..183 CDD:273938
harmonin_N_like 225..301 CDD:448372
PDZ2_L-delphilin-like 369..443 CDD:467226
HN_L-delphilin-R2_like 478..557 CDD:259821
FH2 884..1252 CDD:396655 57/383 (15%)
Blue background indicates that the domain is not in the aligned region.

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