DRSC/TRiP Functional Genomics Resources

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Protein Alignment RSG7 and rgs5a

DIOPT Version :9

Sequence 1:NP_001245722.1 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_956256.1 Gene:rgs5a / 573765 ZFINID:ZDB-GENE-030131-7570 Length:182 Species:Danio rerio


Alignment Length:166 Identity:55/166 - (33%)
Similarity:86/166 - (51%) Gaps:20/166 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 NEFDYFITSPELPNPWQTDSTEMWDTEKNSKEVPVRRVKRWAFSLRELLNDAIGREQFTKFLEKE 532
            |..|..|...|.|..         ..||..|..| ....:|..||.::|:::.|...|..||..|
Zfish    32 NSIDLIIPYQEKPEK---------KPEKLQKATP-EEAAQWRESLDKVLSNSYGLATFKSFLRSE 86

  Fly   533 YSGENLKFWESVQEMKALPQSEIKEA--IQKIWQEFLAPEAPCPVNVD--SKSVELAREAVNSPS 593
            :|.||::|||:.::.|. .::.:|.|  .:||:::|:....|..||:|  :|.|.| |..|:..|
Zfish    87 FSEENIEFWEACEDFKK-TKNPLKMATKAKKIYEDFIQTGGPKEVNIDHFTKDVTL-RNLVDLSS 149

  Fly   594 GPNRWCFDVAASHVYHLMKSDSYSRYLRSDMYKDYL 629
            .    .|::|.|.:|.||:.||:.|:||||.|::.|
Zfish   150 S----TFELAQSRIYTLMEKDSFGRFLRSDQYQELL 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RSG7NP_001245722.1 DEP_RGS7-like 222..309 CDD:239897
GGL 432..493 CDD:128520 5/24 (21%)
RGS_R7-like 504..627 CDD:188660 45/126 (36%)
rgs5aNP_956256.1 RGS 66..179 CDD:295367 43/118 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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