DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RSG7 and rgs4

DIOPT Version :9

Sequence 1:NP_001245722.1 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_954968.1 Gene:rgs4 / 569876 ZFINID:ZDB-GENE-030131-9839 Length:215 Species:Danio rerio


Alignment Length:196 Identity:55/196 - (28%)
Similarity:97/196 - (49%) Gaps:19/196 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 AEALVAYYDQYNEFDYFITSPELPNPWQT--DSTEMWDTEKNSKEVPVRRV-----KRWAFSLRE 514
            |..|.:..|..::..:.:..|:.|...:.  :..:..|.|| .|:..|.|:     ::|..|...
Zfish    10 ATCLKSAKDIKHKIGFLLQKPDPPQEQKALKEKEKEKDKEK-VKDTVVNRITPAETEKWKTSFTN 73

  Fly   515 LLNDAIGREQFTKFLEKEYSGENLKFWESVQEMKALPQSEIKEAIQKIWQEFLAPEAPCPVNVDS 579
            |:.:..||:.|..||:.|||.||::||.:.::.|..|..::....:.|::.::..::|..||:||
Zfish    74 LIKNDDGRKAFASFLQSEYSQENIEFWVACEDFKQTPADKMNLKARNIFERYIEADSPREVNLDS 138

  Fly   580 KSVELAREAVNSPSGPNRWCFDVAASHVYHLMKSDSYSRYLRSDMY-------KDYLNCS-RKKI 636
            .:.|..|:.:......   |||.|.|.::.||:.|||.|:|||.::       .|...|. .||:
Zfish   139 VTREQTRKNLEMCDVS---CFDEAQSKIFTLMEKDSYRRFLRSRLFLELSQPAMDNKPCGLEKKV 200

  Fly   637 K 637
            |
Zfish   201 K 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RSG7NP_001245722.1 DEP_RGS7-like 222..309 CDD:239897
GGL 432..493 CDD:128520 5/37 (14%)
RGS_R7-like 504..627 CDD:188660 40/134 (30%)
rgs4NP_954968.1 RGS 71..183 CDD:295367 37/114 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.