DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RSG7 and Rgs6

DIOPT Version :9

Sequence 1:NP_001245722.1 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_038968710.1 Gene:Rgs6 / 54295 RGDID:3569 Length:552 Species:Rattus norvegicus


Alignment Length:444 Identity:241/444 - (54%)
Similarity:319/444 - (71%) Gaps:23/444 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 EDAPNILVYKKMEAIIEKMQAEST-GVAVRTVKAFMSKVPSVFTGADLVAWILKNFDVEDVTEAL 272
            |.:||::||.|:|.||.|||.:.| ||.:||||:|:||:|||.||.|:|.|::||..:||..||:
  Rat    18 ESSPNMIVYCKIEDIITKMQDDKTGGVPIRTVKSFLSKIPSVVTGTDIVQWLMKNLSIEDPVEAI 82

  Fly   273 HFAHLLSSHGYIFPIDDHALTVKNDGTFYRFQTPYFWPSNCWEPENTDYAVYLCKRTMQNKTRLE 337
            |...|:::.||:|||.||.||:|:||||||||.|||||||||||||||||:||||||||||.|||
  Rat    83 HLGSLIAAQGYVFPISDHVLTMKDDGTFYRFQAPYFWPSNCWEPENTDYAIYLCKRTMQNKARLE 147

  Fly   338 LADYEAENLAKLQKMFSRKWEFIFMQAESQSKVAKKRDKLERKVLDSQERAFWDVHRPMPGCVNT 402
            ||||||||||:||:.|:|||||||||||:|.|:.:|:||.|||:||||||||||||||:||||||
  Rat   148 LADYEAENLARLQRAFARKWEFIFMQAEAQVKIDRKKDKTERKILDSQERAFWDVHRPVPGCVNT 212

  Fly   403 TEIDIKKAYR-----------RGGSSHGTGSAGASLAKNPVEQLTRIIALRKQ------KLERRT 450
            ||:||:|..|           .|.:......:...:...|:.:.|: ..:|||      :::|..
  Rat   213 TEMDIRKCRRLKNPQKVKKSVYGVTDESQSQSPVHIPSQPIRKTTK-DDIRKQITFLNAQIDRHC 276

  Fly   451 IKVSKAAEALVAYYDQYNEFDYFITSPELPNPWQTDSTEMWDTEKNSKEVPVRRVKRWAFSLREL 515
            :|:||.||:|:||.:||.|:|.|||..|..|||.:|...:||.|. |||...:|||||.||..|:
  Rat   277 LKMSKVAESLIAYTEQYVEYDPFITPAEPSNPWISDDITLWDIEM-SKEPSQQRVKRWGFSFDEI 340

  Fly   516 LNDAIGREQFTKFLEKEYSGENLKFWESVQEMKALPQSEIKEAIQKIWQEFLAPEAPCPVNVDSK 580
            |.|.:||:||.:|||.|:|.|||:||.:||::|..|..::.:.:::||||||||.||..:|:||.
  Rat   341 LKDQVGRDQFLRFLESEFSSENLRFWLAVQDLKKQPLQDVAKRVEEIWQEFLAPGAPSAINLDSH 405

  Fly   581 SVELAREAVNSPSGPNRWCFDVAASHVYHLMKSDSYSRYLRSDMYKDYLNCSRK 634
            |.|:..:.|..   ..|:.|:.|..|:|.|||||||:|:|||:.|:|.|...:|
  Rat   406 SYEITSQNVKD---GGRYTFEDAQEHIYKLMKSDSYARFLRSNAYQDLLLAKKK 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RSG7NP_001245722.1 DEP_RGS7-like 222..309 CDD:239897 51/87 (59%)
GGL 432..493 CDD:128520 26/66 (39%)
RGS_R7-like 504..627 CDD:188660 61/122 (50%)
Rgs6XP_038968710.1 DEP_RGS7-like 31..119 CDD:239897 51/87 (59%)
RGS_DHEX 116..217 CDD:375589 84/100 (84%)
GGL 258..319 CDD:128520 25/61 (41%)
RGS_RGS6 328..452 CDD:188691 62/126 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D201579at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101587
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.680

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