DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RSG7 and Rgs5

DIOPT Version :9

Sequence 1:NP_001245722.1 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_062214.1 Gene:Rgs5 / 54294 RGDID:3568 Length:181 Species:Rattus norvegicus


Alignment Length:201 Identity:64/201 - (31%)
Similarity:99/201 - (49%) Gaps:32/201 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 IIALRKQKLER-RTIKVS-----KAAEALVAYYDQYNEFDYFITSPELPNPWQTDSTEMWDTEKN 496
            :.||....||| :.||:.     :..::.|.....|||      .||.|......|.|       
  Rat     5 LAALPHSCLERAKEIKIKLGILLQKPDSAVDLVIPYNE------KPEKPAKAHKPSLE------- 56

  Fly   497 SKEVPVRRVKRWAFSLRELLNDAIGREQFTKFLEKEYSGENLKFWESVQEMKALPQSEIK--EAI 559
                   .|.:|..||.:||....|...|..||:.|:|.|||:||.:.:..|.: :|.||  |..
  Rat    57 -------EVLQWRQSLDKLLQSNYGFASFKSFLKSEFSEENLEFWVACENYKKI-KSPIKMAEKA 113

  Fly   560 QKIWQEFLAPEAPCPVNVDSKSVELAREAVNSPSGPNRWCFDVAASHVYHLMKSDSYSRYLRSDM 624
            ::|::||:..|||..||:|..:.::..:.:..|| |:  .||:|...:|.||:.||..|::||:.
  Rat   114 KQIYEEFIQTEAPKEVNIDHFTKDITMKNLVEPS-PH--SFDLAQKRIYALMEKDSLPRFVRSEF 175

  Fly   625 YKDYLN 630
            ||:.:|
  Rat   176 YKELIN 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RSG7NP_001245722.1 DEP_RGS7-like 222..309 CDD:239897
GGL 432..493 CDD:128520 16/60 (27%)
RGS_R7-like 504..627 CDD:188660 46/124 (37%)
Rgs5NP_062214.1 RGS_RGS5 65..178 CDD:188672 43/116 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.