DRSC/TRiP Functional Genomics Resources

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Protein Alignment RSG7 and Rgs12

DIOPT Version :9

Sequence 1:NP_001245722.1 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_006251413.1 Gene:Rgs12 / 54292 RGDID:3564 Length:1457 Species:Rattus norvegicus


Alignment Length:545 Identity:123/545 - (22%)
Similarity:213/545 - (39%) Gaps:146/545 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 HHHAHPQQSAAGQSAAQPPQPPTATALAVPSASHHQRGGKNEDAPNI----LVYKKMEAIIEKMQ 228
            ||..| |..|.....|....|.|:..|..|::|          .|.:    ::|:.|..:||.::
  Rat   347 HHKIH-QGIARRFGFACTADPDTSGCLEFPASS----------LPVLQFISVLYRDMGELIEGVR 400

  Fly   229 AESTGVAVRTVKAFMS------KVPSVFTGADLVAWILKNFDVEDVTEALHFAHL---LSSHGY- 283
            |          :||:.      :..|..:.:|..   :.||:.|:.:..:....|   .|.||. 
  Rat   401 A----------RAFLDGDADAHQNNSTSSNSDSG---IGNFNQEEKSNRVLVVDLGGGSSRHGQG 452

  Fly   284 ----------------------IFPIDDHA---------------LTVKNDGTFYRFQTPYFWP- 310
                                  .|..|..|               || |:.|..:..:.|   | 
  Rat   453 SSPGWESVSGRGSQPWSAPWNGTFCHDSEAGSPLETSPNTDRFWDLT-KHSGPVFHMEVP---PA 513

  Fly   311 ---------------SNC-----WEPENTDYAVYLCKRTMQNKTRLELAD-YEAENLAKLQKMFS 354
                           |:|     |.|.:. ...:.|......::..:..| :.:.|...|....|
  Rat   514 TLRSSIPPSKRGATGSSCGFNQRWLPVHV-LQEWQCGHASDQESYTDSTDGWSSVNCGTLPPPMS 577

  Fly   355 R------KWEFIFMQAESQSKVAKKRDKLERKVLDSQERAFWDVHRPMPGCVNTTEIDIKKAYRR 413
            :      :.|..|.||...:   :||| ..||....|.  .:..||.    |..|:.| ||:.:.
  Rat   578 KIPADRYRVEGSFAQAPLST---QKRD-WSRKAFGMQN--LFGPHRN----VRKTKED-KKSSKL 631

  Fly   414 GGSSHGTGSAGASLAKNPVEQLTRIIALRKQKLERRTIKVSKAAEALVAYYDQYNEFDYFITSPE 478
            |        .|.:||     |.::..:.|:.....|...::::.:.|    :.....|..:|..:
  Rat   632 G--------RGVALA-----QTSQRTSARRSFGRSRRFSLTRSLDDL----ESATVSDGELTGAD 679

  Fly   479 LPNPWQTD---STEMWDTEKNSKEVPVRRVKRWAFSLRELLNDAIGREQFTKFLEKEYSGENLKF 540
            |.:....:   |.....:.::.:.:..|||..||.|...||.|.:|...|:.||.||:|.||:.|
  Rat   680 LKDCISNNSLSSNASLPSVQSCRRLRERRVASWAVSFERLLQDPVGVRYFSDFLRKEFSEENILF 744

  Fly   541 WESVQEMKALPQSEIKE---AIQKIWQEFLAPEAPCPVNVDSKSVELAREAVNSPSGPNRWCFDV 602
            |::.:....:|..:.||   ..::|:.:||..:|..|||:||:: :||.:.:|:|. |:  .|..
  Rat   745 WQACECFSHVPAHDKKELSYRAREIFSKFLCSKATTPVNIDSQA-QLADDILNAPH-PD--MFKE 805

  Fly   603 AASHVYHLMKSDSYSRYLRSDMYKD 627
            ....:::|||.|||:|:|:|.:|::
  Rat   806 QQLQIFNLMKFDSYTRFLKSQLYQE 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RSG7NP_001245722.1 DEP_RGS7-like 222..309 CDD:239897 22/133 (17%)
GGL 432..493 CDD:128520 8/63 (13%)
RGS_R7-like 504..627 CDD:188660 47/125 (38%)
Rgs12XP_006251413.1 PDZ_signaling 19..94 CDD:238492
PTB_RGS12 227..358 CDD:269984 5/11 (45%)
RGS_RGS12 716..830 CDD:188696 42/117 (36%)
RGS12_us1 836..949 CDD:406910
RBD1_RGS12 962..1031 CDD:340656
Ubiquitin_like_fold 1032..1104 CDD:421700
RGS12_us2 1106..1180 CDD:406908
GoLoco 1188..1209 CDD:214645
RGS12_usC 1238..1387 CDD:406909
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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