DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RSG7 and Rgs3

DIOPT Version :9

Sequence 1:NP_001245722.1 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_006538120.1 Gene:Rgs3 / 50780 MGIID:1354734 Length:1143 Species:Mus musculus


Alignment Length:655 Identity:157/655 - (23%)
Similarity:253/655 - (38%) Gaps:177/655 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 STAAPAKTDCTSSNSSDPLAVAIPEPQSATAVVGGGAGGAAPGTATPSPT---PLANGSNNGTGS 79
            |...||..|...|....| :..:|            ||...|.:..|||:   |:        |.
Mouse   626 SQELPAGQDLPPSKDPSP-SQELP------------AGQDLPPSKDPSPSQELPV--------GQ 669

  Fly    80 SVSPAATGTG-AVATAASAPAAAGTTSASPPASNPTTASTSTASVVGAKTAAATTTSSSSATSSS 143
            .:.|....:| ..|....:|::....:...|..:|.| |||..|..|         ..||.|:..
Mouse   670 DLPPRKDSSGQEAAPGPESPSSEDIATCPKPPQSPET-STSKDSPPG---------QGSSPTTEL 724

  Fly   144 TAAAG---SKQSGSSGGLLTVSGNHHHHHHAHPQQSAAGQSAAQPPQPPTATALAVPSASHHQRG 205
            .:..|   .::|.|...||                      :.:||..|.::|..       |:.
Mouse   725 PSCQGLPAGQESTSQDPLL----------------------SQEPPVIPESSASV-------QKR 760

  Fly   206 GKNEDAPNILVYKKMEAIIEKMQAESTGVAVRTVKAFMSKVPSVFTGADLVAWILKNFDVEDVTE 270
            ..::::|:     .:.::.||..||.|         ..|..|.|.|||.|.| ...||.:.:|..
Mouse   761 LPSQESPS-----SLGSLPEKDLAEQT---------ISSGEPPVATGAVLPA-SRPNFVIPEVRL 810

  Fly   271 ALHFAHLLSSHGYIFPIDDHALTVKNDGTFYRFQTPYFWPSNCWEPENTD--YAVYLCKRTMQNK 333
            ...::.|..:||.....|:.|...:..|.....:          |.:.:|  |.    .|:...:
Mouse   811 DNAYSQLDGAHGGSSGEDEDAEEGEEGGEGEEDE----------EDDTSDDNYG----DRSEAKR 861

  Fly   334 TRLELADYEAENLAKLQKMFSRKWEFIFMQAESQSKVAKKRDKLERKVL-DSQERAF-------- 389
            :.|......||....|:...|                .::|...|..:| :|:...|        
Mouse   862 SSLIETGQGAEGGFSLRVQNS----------------LRRRTHSEGSLLQESRGPCFASDTTLHC 910

  Fly   390 ---------WDVHRPMPGCVNTTEIDIKKAYRRGGSSHG-----TG---SAGASLAKNPVEQLTR 437
                     |.:  |.|..:.      |:..|.|||.|.     ||   .:|..|.:  .::.:|
Mouse   911 SDGEGATSTWAI--PSPRTLK------KELGRNGGSMHHLSLFFTGHRKMSGTDLTE--CDEASR 965

  Fly   438 IIALRKQKLERRTIKVSKAAEALVAYYDQYNEFDYFITSPELPNPWQTDSTEMWDTEKNSKEVPV 502
                     :|::..::|..:..:|.:.:.||      ||......:||.     |.|:.|....
Mouse   966 ---------KRKSKNIAKDMKNKLAIFRRRNE------SPGAQPASKTDK-----TTKSFKPTSE 1010

  Fly   503 RRVKRWAFSLRELLNDAIGREQFTKFLEKEYSGENLKFWESVQEMKAL-PQSEIKEAIQKIWQEF 566
            ..:| |:.||.:||....|.|.|..||..|:|.|||:||.:.::.|.: .||::....:||:.||
Mouse  1011 EALK-WSESLEKLLLHKYGLEVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMAAKAKKIFAEF 1074

  Fly   567 LAPEAPCPVNVDSKSVELAREAVNSPSGPNRWCFDVAASHVYHLMKSDSYSRYLRSDMYKDYLNC 631
            :|.:|...||:||.:.|..:|.:.|.:   |.|||:|...::.||:.|||.|:||||:|.|.:| 
Mouse  1075 IAIQACKEVNLDSYTREHTKENLQSIT---RGCFDLAQKRIFGLMEKDSYPRFLRSDLYLDLIN- 1135

  Fly   632 SRKKI 636
             :||:
Mouse  1136 -QKKM 1139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RSG7NP_001245722.1 DEP_RGS7-like 222..309 CDD:239897 22/86 (26%)
GGL 432..493 CDD:128520 10/60 (17%)
RGS_R7-like 504..627 CDD:188660 50/123 (41%)
Rgs3XP_006538120.1 C2_RGS-like 35..154 CDD:176067
PDZ_signaling 195..268 CDD:238492
PHA03307 578..>801 CDD:223039 54/249 (22%)
RGS_RGS3 1019..1132 CDD:188668 47/115 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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