DRSC/TRiP Functional Genomics Resources

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Protein Alignment RSG7 and rgs3a

DIOPT Version :9

Sequence 1:NP_001245722.1 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_009300312.2 Gene:rgs3a / 445235 ZFINID:ZDB-GENE-040801-150 Length:896 Species:Danio rerio


Alignment Length:834 Identity:166/834 - (19%)
Similarity:296/834 - (35%) Gaps:256/834 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QATNASSTAAPAKTDCTSSNSSDPLAVAIPEPQSATAVVG--------GGAG----------GAA 58
            :::|..:..:|||  |..:..:.||.....:.::...|||        .|||          .|.
Zfish    99 KSSNYDTPVSPAK--CKRAEKAPPLPPLPAQHRTGHRVVGQNGSEDLATGAGVLWGERRTAVDAK 161

  Fly    59 PGTATPSPTPL--ANGSNNGTGSSVSPAATGTGA-----VATAASAPAAAGTTSASPPASNPTTA 116
            .||.|...|.:  :||.|....|.::|.:...|:     ..|....|||. |:...|||     |
Zfish   162 TGTQTLRGTRVKASNGENYIILSPINPGSQVLGSGDPHRTLTGQMYPAAQ-TSVPLPPA-----A 220

  Fly   117 STSTASVVGAKTA----AATTTSSSSATSSSTAAAGSKQSGSSGGLLTVSGNHHHHHHAHPQQSA 177
            |..:|..:.::|.    :..:.|.:.....:|:...:.|:      .|:..:|..|.:.......
Zfish   221 SAQSAPGLASRTCFLRRSGNSKSKTQQIYQNTSNFANYQN------CTIVRSHVPHANYSTYVKV 279

  Fly   178 AGQSAAQP--PQP-----PTATALAVPSASHHQRGGKN------------------EDAP---NI 214
            ..:....|  .||     ||.|.|.......::  .|:                  ||.|   |:
Zfish   280 TPKVLIFPIFVQPVDLCSPTRTLLITEEMILYE--SKHFSIKVTVFIYSDLMLVTREDEPGRCNV 342

  Fly   215 L-------------------------VYKKMEAIIEKMQAESTGVAVRTVKAFMSKVPS---VFT 251
            |                         :.:|.:.:: .::|:|.....|..:.....:..   :|.
Zfish   343 LQNPLYLRHLQLRDDHCKDLRFYLIHMTEKCDCLL-SLEADSLEQKARVCQCLSENIQKQLRIFH 406

  Fly   252 GAD---LVAWILKNFDVEDVTEALHFAHLLSSHGYIFPIDDHAL--------------------- 292
            |..   |...:|:  ..:|....|....:.|.       |||:|                     
Zfish   407 GRQTFRLPQQMLE--PKQDEPCDLRGRRMTSE-------DDHSLGSLSDASATTASSPQSRSLTL 462

  Fly   293 ----------------------TVKNDGTFYRFQTPYFW-PSNCWEPENTDYAVYLCKRT----- 329
                                  |..:||..........| ...|.|.| |:.:.:|..:|     
Zfish   463 LEELCTSLEETCHPVPPTPPPSTEGDDGRSTESSMNEIWREEECKEKE-TEESDFLHAQTKDCDD 526

  Fly   330 -------MQNKTRLELADYEAENLA--------KLQKMFSRK------WEFIFMQAESQSKVAKK 373
                   :..:...|:||..|.:.:        :|.:.:|..      .:..:.:.|...:..::
Zfish   527 CDEKQVIIDEENASEVADTNAPSSSSSFIIPELRLDRSYSADALSTPGTDEEYDEDEDDEEEEEE 591

  Fly   374 RDK----LERKVLDSQERAFWD---------------------------VHRPMPGCVNTTE--- 404
            .|.    |||.  ||:.|:..:                           :..|...|..:..   
Zfish   592 EDSDDNYLERS--DSKRRSMVEAGSCEKHPGGLSVQNSLRRRTHSEGSLLQDPRTTCFTSDNAIN 654

  Fly   405 -IDIKKAYRRGGSSHGTGSAGASLAKN--PVEQLTRIIALRKQKL--------------ERRTIK 452
             :::..|::.|.:.....:....|.||  .:.||..:.:.||...              ::::..
Zfish   655 CMEVSGAHKGGWTLPSPKTLKKELTKNGGSMHQLCMLFSGRKLSASSECSCDVGPDGTKKKKSKN 719

  Fly   453 VSKAAEALVAYYDQYNEFDYFITSPELPNPWQTDSTEMWDTEKNSKEVPVRRVKRWAFSLRELLN 517
            ::|..:..:|:..:.||           :|..|.::::..|.|:.|..|...:| |..||.:||.
Zfish   720 LAKDMKNRLAFLRRRNE-----------SPGSTPASKLDKTMKSVKPTPEEAMK-WGESLDKLLV 772

  Fly   518 DAIGREQFTKFLEKEYSGENLKFWESVQEMKAL-PQSEIKEAIQKIWQEFLAPEAPCPVNVDSKS 581
            ...|...|..||..|:|.|||.||.:.::.|.: .||::....:||:.||:|.::...||:||.:
Zfish   773 HKYGLAAFRAFLRTEFSEENLDFWLACEDYKKIKSQSKMTSKAKKIFAEFIAIQSCKEVNLDSYT 837

  Fly   582 VELAREAVNSPSGPNRWCFDVAASHVYHLMKSDSYSRYLRSDMYKDYLNCSRKK 635
            .|..:|.:.:   .||.||::|...:|.||:.|||.|:|||::|.|.:|  :||
Zfish   838 REHTKENLQN---INRSCFELAQRRIYGLMEKDSYPRFLRSELYMDLVN--QKK 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RSG7NP_001245722.1 DEP_RGS7-like 222..309 CDD:239897 17/135 (13%)
GGL 432..493 CDD:128520 10/74 (14%)
RGS_R7-like 504..627 CDD:188660 47/123 (38%)
rgs3aXP_009300312.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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