DRSC/TRiP Functional Genomics Resources

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Protein Alignment RSG7 and rgs-6

DIOPT Version :9

Sequence 1:NP_001245722.1 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_001294820.1 Gene:rgs-6 / 180840 WormBaseID:WBGene00004349 Length:734 Species:Caenorhabditis elegans


Alignment Length:151 Identity:44/151 - (29%)
Similarity:78/151 - (51%) Gaps:12/151 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   475 TSP--ELPNPWQTDSTEMWDTEKNSKEVPVRRVKRWAFSLRELLNDAIGREQFTKFLEKEYSGEN 537
            |||  |..|...:....:...|.||.    |.:|    ..::::.|.:.|..|.:|||:::..||
 Worm    16 TSPNNETSNSCLSMGVGVASNETNSS----RELK----IFKKVIRDPVLRAPFQEFLEQQFCAEN 72

  Fly   538 LKFWESVQEMKALPQSEIKEAI-QKIWQEFLAPEAPCPVNVDSKSVELAREAVNSPSGPNRWCFD 601
            |.|:.:|::.|.:...:.:.:. ::|:..:.|..:..|||:|:.:.:..||.|.|...|.. .:|
 Worm    73 LNFYLAVEQFKEIQDFQERSSFGRRIFDRYFAMNSTEPVNIDNSTSKRIRETVESGGFPLD-TYD 136

  Fly   602 VAASHVYHLMKSDSYSRYLRS 622
            ||...:.||:|.|.:.|:|||
 Worm   137 VAQYQILHLLKYDCWPRFLRS 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RSG7NP_001245722.1 DEP_RGS7-like 222..309 CDD:239897
GGL 432..493 CDD:128520 5/19 (26%)
RGS_R7-like 504..627 CDD:188660 35/120 (29%)
rgs-6NP_001294820.1 RGS 47..157 CDD:214613 32/110 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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