DRSC/TRiP Functional Genomics Resources

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Protein Alignment RSG7 and rgs-3

DIOPT Version :9

Sequence 1:NP_001245722.1 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_495223.1 Gene:rgs-3 / 174020 WormBaseID:WBGene00004346 Length:363 Species:Caenorhabditis elegans


Alignment Length:310 Identity:73/310 - (23%)
Similarity:121/310 - (39%) Gaps:79/310 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 VLDSQERAFWDVHRPMPGCVNTTEIDIKKAYRRGGSSHGTGSAGASLAKNPVEQLTRIIALRK-- 443
            :.|.:|:    |:|..|....|..::..:|     :|...|:....|..:..:||.|:...:.  
 Worm    80 MFDGKEK----VNREQPPMPTTDGVEYPRA-----ASWAAGNCANVLNDDKGKQLFRVFLFQSLA 135

  Fly   444 ----------QKLERRTI---KVSKAAEALVAYYDQYNEFDYFITSPELPNPWQTDSTEMWDTEK 495
                      :||::..|   ||:.|.|.|..|....|     ::|..:.:.....::|..|.|:
 Worm   136 EENLAFLEAMEKLKKMKISDEKVAYAKEILETYQGSIN-----LSSSSMKSLRNAVASETLDMEE 195

  Fly   496 NS---KEV--------------------------PVRRVKRWAFSLRELLNDAIGREQFTKFLEK 531
            .:   |||                          |....::||.|...||.:.:||..|..||..
 Worm   196 FAPAIKEVRRLLENDQFPRFRRSELYLEYLEELLPRSYAEKWAQSFEGLLGNHVGRHHFRIFLRS 260

  Fly   532 EYSGENLKFWESVQEM-----KALPQSEIKEAIQKIW-QEFLAPEAPCPVNVDSKSVELAREAVN 590
            .::.|||:|||:|.|.     ||...:.:.:.|...: .|....|...|..|        |:.:.
 Worm   261 IHAEENLRFWEAVVEFRSSRHKANAMNNLGKVILSTYLAEGTTNEVFLPFGV--------RQVIE 317

  Fly   591 SPSGPNR---WCFDVAASHVYHLMKSDSYSRYLRSDMYKDYLNCSRKKIK 637
            .....|:   ..||.|..||..::::|.|.|:|:|..|.|.|:    |:|
 Worm   318 RRIQDNQIDITLFDEAIKHVEQVLRNDPYVRFLQSSQYIDLLS----KLK 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RSG7NP_001245722.1 DEP_RGS7-like 222..309 CDD:239897
GGL 432..493 CDD:128520 15/75 (20%)
RGS_R7-like 504..627 CDD:188660 38/131 (29%)
rgs-3NP_495223.1 RGS 112..218 CDD:214613 21/110 (19%)
RGS 240..358 CDD:279009 36/125 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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