DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RSG7 and rgs9

DIOPT Version :9

Sequence 1:NP_001245722.1 Gene:RSG7 / 32674 FlyBaseID:FBgn0024941 Length:647 Species:Drosophila melanogaster
Sequence 2:XP_012825441.1 Gene:rgs9 / 100125123 XenbaseID:XB-GENE-5955936 Length:556 Species:Xenopus tropicalis


Alignment Length:413 Identity:158/413 - (38%)
Similarity:239/413 - (57%) Gaps:17/413 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 KMEAIIEKMQAESTGVAVRTVKAFMSKVPSVFTGADLVAWILKNFDVEDVTEALHFAHLLSSHGY 283
            |||.::..||....|:.:|..:..::.:|...||.|:|.|:::...:.: .||.|..:||..:||
 Frog    21 KMERLVVSMQDPDMGIKMRNQRLLITVIPHAMTGNDVVEWLIQKLSISE-EEAQHLGNLLVRYGY 84

  Fly   284 IFPI-DDHALTVKNDGTFYRFQTPYFWPSNCWEPENTDYAVYLCKRTMQNKTRLELADYEAENLA 347
            |:|: |...|.::.|.:.|||||||||.:|.|.....|||:||.|:.::.:.  ||.:||.:|..
 Frog    85 IYPLKDPRNLILRADDSPYRFQTPYFWTTNKWPATELDYAIYLAKKNIRKQG--ELVEYEKDNYN 147

  Fly   348 KLQKMFSRKWEFIFMQAESQSKVAKKRDKLERKVLDSQERAFWDVHRPMPGCVNTTEIDIKKAYR 412
            :|.|..:..|:|:.|||..|.:.||:|.|.:|.|::.||:|:|.|.:|.|||:|..|    ....
 Frog   148 QLHKRINHTWDFVVMQAREQLRAAKQRRKGDRIVIECQEQAYWLVSKPSPGCLNVME----HGPE 208

  Fly   413 RGGSSHGTGSAGASLAKNPVEQLTRIIALRKQKLERRTIKVSKAAEALVAYYDQYNEFDYFITSP 477
            ||.:..||    ..|.|| ::...|.:...|:.:.|..:|.|...|..:.:.:||...|..::..
 Frog   209 RGNACGGT----MQLGKN-IDFYKREMDYLKKAMGRTRVKSSICLEGFLKFSEQYLPHDPIMSGC 268

  Fly   478 ELPNPWQTDSTEMWDTEKNSKEVPVR-RVKRWAFSLRELLNDAIGREQFTKFLEKEYSGENLKFW 541
            ...|||.||....|........:|.: ||.||.|:..|||||..||::|.:|||||:|.|||.||
 Frog   269 LPSNPWITDDVTYWTINAPMVAMPSKLRVDRWTFNFMELLNDPRGRKEFLQFLEKEFSAENLCFW 333

  Fly   542 ESVQEMKALPQSEIKEAIQKIWQEFLAPEAPCPVNVDSKSVELAREAVNSPSGPNRWCFDVAASH 606
            |:.:|::...||:|...::.::|:||||.|...||:|||::|...|.:.:   |:|:..|.|..|
 Frog   334 EACEELRYGEQSKIASTVESVYQQFLAPGATRWVNIDSKTMEKTLEGIKN---PHRYVLDDAQMH 395

  Fly   607 VYHLMKSDSYSRYLRSDMYKDYL 629
            :|.|||.|||.|||:|||||:.|
 Frog   396 IYMLMKKDSYPRYLKSDMYKNLL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RSG7NP_001245722.1 DEP_RGS7-like 222..309 CDD:239897 29/87 (33%)
GGL 432..493 CDD:128520 15/60 (25%)
RGS_R7-like 504..627 CDD:188660 61/122 (50%)
rgs9XP_012825441.1 DEP_RGS7-like 24..111 CDD:239897 29/87 (33%)
RGS_DHEX 108..207 CDD:375589 42/104 (40%)
GGL 223..282 CDD:128520 14/58 (24%)
RGS_RGS11 295..420 CDD:188694 63/127 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D201579at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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