DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4829 and ECM38

DIOPT Version :9

Sequence 1:NP_728030.2 Gene:CG4829 / 32672 FlyBaseID:FBgn0030796 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_013402.1 Gene:ECM38 / 851006 SGDID:S000004290 Length:660 Species:Saccharomyces cerevisiae


Alignment Length:704 Identity:183/704 - (25%)
Similarity:313/704 - (44%) Gaps:91/704 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 PTTISTEATITTIAPSGLATTISTSTTTIATSATQQPPTATTTTTATRTTTTSRTDSNPSPTPKT 212
            |.|::|...:.......|...:|...:.:.:.|:|:        |..|.....|..:|.......
Yeast     9 PKTLNTCFILHIFTLLTLGVLVSGMPSKMVSFASQE--------TLQRINNLLRGSANRDVDIIA 65

  Fly   213 FHLTDDEQQQEPETETDNIGNLNLGITSTATTPSDDVLPNVAASTAATTAAPPTWLADQIKIDTS 277
            .:|..|:.....:.:..||              ..|.||.           .|:...|:      
Yeast    66 EYLKKDDDDDGGDKDHHNI--------------DIDPLPR-----------RPSLTPDR------ 99

  Fly   278 EQYNSILGVYQHGAVSSDNLECSK--IGSGILQKNGS-AVDAAIAALLCNGLLTLQSMGIGGGHL 339
                .:|.|..|||:|||...||.  |...:|:..|| |.|||:...||.|::...:.|||||..
Yeast   100 ----QLLKVGLHGAISSDLEVCSNLTINEVLLKFPGSNAADAAVTQALCKGMVNFFNSGIGGGGY 160

  Fly   340 MNVYNRKERHATAIDAREVAPYEATEDMFAQQPENSDKGPLSIAVPGEVMG-YHVAHQK-FGQLP 402
            :....:.:....:||.||.||.::.:.||......|..|.|::.||||:|| |.:..:: .||:.
Yeast   161 VVFSGKDDEDHLSIDFREKAPMDSHKFMFENCSLCSKIGGLAVGVPGELMGLYRLFKERGSGQVD 225

  Fly   403 WAELVAPSLELCEKGYHVSQHMERALDIALP-YIKEHEQYQIYLNAETGKPHVAGTVVKPPKNLC 466
            |.:|:.|..:|...|:.:.:.:...|::... ::...|.:...||:........|..:|.|. |.
Yeast   226 WRDLIEPVAKLGSVGWQIGEALGATLELYEDVFLTLKEDWSFVLNSTHDGVLKEGDWIKRPA-LS 289

  Fly   467 KTYKLLAENGPMDMY---NGTIAKLLAEDLQDMGSIILADDLESYEADVINSITMDL-------- 520
            .....||:||.:..:   :..|||.:.:.:.....|:...|:.||:..|...::|.:        
Yeast   290 NMLMELAKNGSVAPFYDPDHWIAKSMIDTVAKYNGIMNLQDVSSYDVHVTKPLSMKIRKGANFIP 354

  Fly   521 -GDDTLYVVPPVSSGSVVAHVLAILQGYNFTAQDLSTEELKARTIHRFAEAMKFAFAQRPELGDM 584
             .|.|:......|||:.:...|.|:..:    |:....:.:..|.:...|:||:..:.|..|||.
Yeast   355 DNDMTVLTSSGSSSGAALLAALRIMDNF----QNQEGGDYEKETTYHLLESMKWMASARSRLGDF 415

  Fly   585 HFIDARELVSRLNSPDFGDQNRAKINDSHVLPDAQAYGANFAAIE---------DLD---GTSNL 637
            ......:.:..:..|::..:....|.       ..:...||..:|         |::   ||::.
Yeast   416 EGEALPKHIEEVLDPEWALKAVKSIK-------RNSQDGNFKTLENWTLYDPAYDINNPHGTAHF 473

  Fly   638 VVLAPNGDAVSVTSSINSYFGSGLIGPRTGIVLNNGMNDFAV--KNNIFALPQSQSNKIEAHKRA 700
            .::..:|:|||:|::||..|||.:..|:||::.||.|:|||.  |:|.|.|..|..|..|..||.
Yeast   474 SIVDSHGNAVSLTTTINLLFGSLVHDPKTGVIFNNEMDDFAQFNKSNSFELAPSIYNFPEPGKRP 538

  Fly   701 MSSQSPILLADKDGNMKMVIGAAGGSKIIPAVVEVAANVLWFGKDLRQAVDAPRFYHQLMPDVLE 765
            :||.:|.::..:.|...:|:||:|||:|..:|::......|:...:.:.:..||.:|||:||.:|
Yeast   539 LSSTAPTIVLSELGIPDLVVGASGGSRITTSVLQTIVRTYWYNMPILETIAYPRIHHQLLPDRIE 603

  Fly   766 YEE-DGFTESLLQLLTKRGHKLKSISVKTGSVVTAISRNATAIYANADY-RKRG 817
            .|. ....:::|..|.:.|:.:|.:..|  |||.||.......:|.:|| ||||
Yeast   604 LESFPMIGKAVLSTLKEMGYTMKEVFPK--SVVNAIRNVRGEWHAVSDYWRKRG 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4829NP_728030.2 G_glu_transpept 306..817 CDD:279371 150/542 (28%)
ECM38NP_013402.1 G_glu_transpept 101..652 CDD:418549 159/564 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 227 1.000 Domainoid score I423
eggNOG 1 0.900 - - E1_COG0405
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68450
Inparanoid 1 1.050 227 1.000 Inparanoid score I741
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58031
OrthoFinder 1 1.000 - - FOG0000229
OrthoInspector 1 1.000 - - otm46510
orthoMCL 1 0.900 - - OOG6_100578
Panther 1 1.100 - - LDO PTHR11686
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R489
SonicParanoid 1 1.000 - - X210
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.