DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4829 and si:ch73-236c18.3

DIOPT Version :9

Sequence 1:NP_728030.2 Gene:CG4829 / 32672 FlyBaseID:FBgn0030796 Length:822 Species:Drosophila melanogaster
Sequence 2:XP_017212376.1 Gene:si:ch73-236c18.3 / 794105 ZFINID:ZDB-GENE-121214-50 Length:548 Species:Danio rerio


Alignment Length:560 Identity:200/560 - (35%)
Similarity:299/560 - (53%) Gaps:51/560 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 YQHGAVSSDNLECSKIGSGILQKNGSAVDAAIAALLCNGLLTLQSMGIGGGHLMNVYNRKERHAT 351
            |...||::|...||.||..|||:.|||||||||||||..::..||:|||||.:..:||.......
Zfish    16 YGKAAVATDAETCSDIGRDILQRGGSAVDAAIAALLCVSVINPQSIGIGGGVVFTIYNASTGKVE 80

  Fly   352 AIDAREVAPYEATEDMFAQQPENSDKGPLSIAVPGEVMGYHVAHQKFGQLPWAELVAPSLELCEK 416
            .|:|||.||..||.|||.....|:..| |.||||||:.||.:||.:.|:|.|.||..||::|..|
Zfish    81 TINARETAPMSATADMFDNNNNNTKPG-LLIAVPGELRGYKLAHDRHGRLEWKELFKPSIKLARK 144

  Fly   417 GYHVSQHMERALDIALPYIKEHEQ--------YQIYLNAETGKPHVAGTVVKPPKNLCKTYKLLA 473
            |:.:.:.:..|       |||.|.        .:::.:|:...|.:...:  ....|..||:.::
Zfish   145 GFKIGKALADA-------IKEEEDKFQKNTTLCEVFCDADYNLPKINDYI--RFSQLAATYRKIS 200

  Fly   474 ENGPMDMYNGTIAKLLAEDLQDMGSIILADDLESYEADVINS-ITMDLGDDTLYVVPPVSSGSVV 537
            |.||...|||::.:.:.:|::..|..|...||..||..:..| |..::|....:.......|.|:
Zfish   201 EEGPDAFYNGSLTQSIVDDIRAAGGNITRKDLTDYEPVLTESAINFNVGKYIFHAPGAPFGGPVL 265

  Fly   538 AHVLAIL--------QGYNFTAQDLSTEELKARTIHRFAEAMKFAFAQRPELGD-MHFIDARELV 593
            ..::.||        .|:|.:.:.:||.:.|..|.||..|.:..|..::.:||| :......|:|
Zfish   266 TLIMKILLGNGTKGFSGFNLSKKSVSTTKNKTLTYHRIIETLCIADVEKTKLGDPLKQPIVNEVV 330

  Fly   594 SRLNSPDFGDQNRAKINDSHVLPDAQAYGANFA-AIEDLDGTSNLVVLAPNGDAVSVTSSINSYF 657
            ..:.|..|.|.||::|:||  :..|.....|.: ::.|..|||::.|:...|:||:||||||:||
Zfish   331 KNMISDSFADHNRSEIDDS--IATACNKSNNVSKSVPDDSGTSHVSVIDAEGNAVAVTSSINNYF 393

  Fly   658 GSGLIGPRTGIVLNNGMNDFAVKNNIFALPQSQSNKIEAHKRAMSSQSPILLAD--KDGNMK--M 718
            |||::...|||:.|:.|.||.         .::.|:||..||.:||..|.::.|  |:.:.|  |
Zfish   394 GSGVMSECTGIIFNDQMKDFT---------DNEHNRIEKGKRPLSSMCPTIILDEEKENSEKVTM 449

  Fly   719 VIGAAGGSKIIPAVVEVAANVLWFGKDLRQAVDAPRFYHQLMPDVLEYEEDGFTESLLQLLTKRG 783
            |:||.||:.|..||.:|..|.|:|..||:.||:|.|.  |:..:|... |.||.:.:::.|.::.
Zfish   450 VVGAEGGTNITTAVAQVILNYLYFDYDLKDAVNASRV--QIKNNVTNV-EPGFDKDVIKGLEQKY 511

  Fly   784 HKLKSISVKTG-SVVTAISRNATAIYANADYRKRGGVAGF 822
            |   .|..||. |||..|.|....:.|.:|:||.|..||:
Zfish   512 H---VIGNKTEVSVVQVIDREKDKVCAVSDHRKYGNPAGY 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4829NP_728030.2 G_glu_transpept 306..817 CDD:279371 189/534 (35%)
si:ch73-236c18.3XP_017212376.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58031
OrthoDB 1 1.010 - - D176986at33208
OrthoFinder 1 1.000 - - FOG0000229
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100578
Panther 1 1.100 - - O PTHR11686
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X210
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.930

Return to query results.
Submit another query.