DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4829 and Ggt5

DIOPT Version :9

Sequence 1:NP_728030.2 Gene:CG4829 / 32672 FlyBaseID:FBgn0030796 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_062108.2 Gene:Ggt5 / 29566 RGDID:2684 Length:572 Species:Rattus norvegicus


Alignment Length:559 Identity:182/559 - (32%)
Similarity:278/559 - (49%) Gaps:50/559 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 YQHGAVSSDNLECSKIGSGILQKNGSAVDAAIAALLCNGLLTLQSMGIGGGHLMNVYNRKERHAT 351
            :...||::|:..||.||..|||:.||.||||||||:|.|::..||||:|||.:..:||.......
  Rat    41 FTRAAVAADSKICSDIGRVILQQQGSPVDAAIAALICTGVVNPQSMGLGGGVVFTIYNASTGKVE 105

  Fly   352 AIDAREVAPYEATEDM-FAQQPENS---DKGPLSIAVPGEVMGYHVAHQKFGQLPWAELVAPSLE 412
            .|:|||..|  |:.|. ...|..|:   ..|...|.||||:.||..||:::|:||||:|..|::.
  Rat   106 VINARETVP--ASHDQRLLDQCTNALPLCTGAQWIGVPGELRGYAEAHRRYGRLPWAQLFQPTIA 168

  Fly   413 LCEKGYHVSQHMERALDIAL--PYIKEHEQYQIYLNAETGKPHVAGTVVKPPKNLCKTYKLLAEN 475
            |..:|:.|...:.:.|:.:.  |.:......|::.|   |...:......|...|..|.:.:|:.
  Rat   169 LLREGFRVPPILSQFLNTSFLQPCLNSSTLRQLFFN---GTETLRSQDPLPWPALANTLETVAKE 230

  Fly   476 GPMDMYNGTIAKLLAEDLQDMGSIILADDLESYEADVINSITMDLGDDTLYVVPPVSSGSVVAHV 540
            |...:|.|.:.:.|.||:...||.:...||.::...|:..:.|.||:.|||..||.:.|::::.:
  Rat   231 GAEVLYTGKLGQTLVEDIAWQGSQLTVQDLAAFRPKVVEPLEMALGNYTLYSPPPPAGGAILSFI 295

  Fly   541 LAILQGYNFTAQDLSTEELKARTIHRFAEAMKFAFAQRPELGDMHFIDARELVS----------- 594
            |.:|:|:||:|:.::..|.|....|...||:|||..||..|.|.:.....:.:|           
  Rat   296 LNVLKGFNFSAETVAGPEGKVNMYHHLVEALKFAVGQRWRLWDPYSHPGIQNISQDLLRETLAQH 360

  Fly   595 -RLNSPDFGDQNRAKINDSHVLPDAQAYGANFAAIEDLDGTSNLVVLAPNGDAVSVTSSINSYFG 658
             |......||...:..|.|.|..::.             |||::.||..:|.||:.||:||:.||
  Rat   361 IRQQIDGRGDHQLSHYNLSGVRGNSM-------------GTSHVSVLGEDGSAVAATSTINTPFG 412

  Fly   659 SGLIGPRTGIVLNNGMNDFAVKNNIFALPQSQSNKIEA-HKRAMSSQSPILLADKDGNMKMVIGA 722
            :.:..|||||:|||.:.|...::.    |.|....... .::..||..|.:|.::....|:|||.
  Rat   413 AMVYSPRTGILLNNELLDLCWRHK----PGSTVTPPPVPGEQPPSSMVPSILINEVQGSKLVIGG 473

  Fly   723 AGGSKIIPAVVEVAANVLWFGKDLRQAVDAPRFYHQLMPDVLEYEEDGFTESLLQLLTKRGHKLK 787
            |||..||.||.:...|.||.|..|..|:.|| ..|......:|||.. |.:.:.:.|..||   :
  Rat   474 AGGELIISAVTQAIVNKLWLGFSLTDAIAAP-ILHVNSKGHVEYEPK-FNQEVRKGLQDRG---Q 533

  Fly   788 SISVKTGSV----VTAISRNATAIYANADYRKRGGVAGF 822
            |.|.....|    |.|:.:....:||.:|.||.|..:|:
  Rat   534 SQSQSQRPVFLNSVQAVFQEGPCVYAASDLRKAGKASGY 572

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG4829NP_728030.2 G_glu_transpept 306..817 CDD:279371 173/533 (32%)
Ggt5NP_062108.2 G_glu_transpept 60..567 CDD:395806 173/533 (32%)