DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4829 and LOC110439994

DIOPT Version :9

Sequence 1:NP_728030.2 Gene:CG4829 / 32672 FlyBaseID:FBgn0030796 Length:822 Species:Drosophila melanogaster
Sequence 2:XP_021333878.1 Gene:LOC110439994 / 110439994 -ID:- Length:131 Species:Danio rerio


Alignment Length:92 Identity:48/92 - (52%)
Similarity:62/92 - (67%) Gaps:0/92 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 YQHGAVSSDNLECSKIGSGILQKNGSAVDAAIAALLCNGLLTLQSMGIGGGHLMNVYNRKERHAT 351
            |.:.||::|..:||:||..|||:||||||||||||||..|:..||||||||.:..:||.......
Zfish    37 YNNAAVAADARKCSEIGRDILQRNGSAVDAAIAALLCVSLVNAQSMGIGGGLVFTIYNASSGKVE 101

  Fly   352 AIDAREVAPYEATEDMFAQQPENSDKG 378
            .|::||.||..|:|:||...||.:..|
Zfish   102 TINSRETAPMSASENMFGTNPEKAKPG 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4829NP_728030.2 G_glu_transpept 306..817 CDD:279371 40/73 (55%)
LOC110439994XP_021333878.1 G_glu_transpept 55..>127 CDD:327525 39/71 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D176986at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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