DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk28 and Asic1

DIOPT Version :9

Sequence 1:NP_573169.2 Gene:ppk28 / 32671 FlyBaseID:FBgn0030795 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_006257440.1 Gene:Asic1 / 79123 RGDID:71062 Length:559 Species:Rattus norvegicus


Alignment Length:585 Identity:130/585 - (22%)
Similarity:216/585 - (36%) Gaps:181/585 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRQSGSSGCKKD--------SESDDDENTICSRAAIKRSVVYYLKNSTLHGLKYIAEESITIPER 65
            |:|..||..:::        ||.|:.:::       .|.:|.:..:.||||..::..|....|.:
  Rat    31 RQQQDSSESEEEEEKEMEAGSELDEGDDS-------PRDLVAFANSCTLHGASHVFVEGGPGPRQ 88

  Fly    66 IFFGLAFVLVVILSVFFISNVYVKWSASPIIISTSAKQKLTSNMPFPAITICNLNQALLSKV--- 127
            ..:.:|||:.:...:..:.:....:.:.|.:  |...:..|:.:.|||:|.||.|...||::   
  Rat    89 ALWAVAFVIALGAFLCQVGDRVAYYLSYPHV--TLLDEVATTELVFPAVTFCNTNAVRLSQLSYP 151

  Fly   128 DRIGRTSTNFSLLMGLCDQGGDTTISYIGTWKYFKAILVDVAQP-------------------C- 172
            |.:     ..:.::|| |:..|..              |.:|.|                   | 
  Rat   152 DLL-----YLAPMLGL-DESDDPG--------------VPLAPPGPEAFSGEPFNLHRFYNRSCH 196

  Fly   173 --EKMLLYCSF-----GSREEDCSWLFTSILTDDGLCCNFNALHPSYLIRNYSDDVRLETAHPNT 230
              |.||||||:     |...      |:.:.|..|.|..||:        ......||:|     
  Rat   197 RLEDMLLYCSYCGGPCGPHN------FSVVFTRYGKCYTFNS--------GQDGRPRLKT----- 242

  Fly   231 RYELIDWTPEKGYARNLPEFYFPRTSGGTGIRMGLTVVLNASIAEYYCT------KSMSVGFKVL 289
                                    ..||||  .||.::|:....||...      .|...|.||.
  Rat   243 ------------------------MKGGTG--NGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQ 281

  Fly   290 VHNPAELPKVSNYGFVVTAG-------REARIPIEPVYEDALPTIRSIKKSVRRCLFSDENDLAY 347
            :|:..|.|.:...||.|..|       :|.|:    :|   ||:......:|..       |..:
  Rat   282 IHSQDEPPFIDQLGFGVAPGFQTFVSCQEQRL----IY---LPSPWGTCNAVTM-------DSDF 332

  Fly   348 YRTYSRKNCELECEAKLLLRECSCVLYYLPRIDPLARVCGPND-NQCTD-----RVQTEIESSLT 406
            :.:||...|.::||.:.|:..|:|.:.::|...|   .|.|.. .:|.|     .|:.:.|..:.
  Rat   333 FDSYSITACRIDCETRYLVENCNCRMVHMPGDAP---YCTPEQYKECADPALDFLVEKDQEYCVC 394

  Fly   407 NLSCENCWPGCFELT-YRATLSTASIVSD-------PRFQAGENLPEYIFHGPYSNASEISILHF 463
            .:.|        .|| |...||...|.|.       .:|...|   :||       ...|.:|..
  Rat   395 EMPC--------NLTRYGKELSMVKIPSKASAKYLAKKFNKSE---QYI-------GENILVLDI 441

  Fly   464 YYMTNIFRSTTKSEMFGFTEFLSNTGGLLGLFMGFSIFSVIEIFFYITVRPYCASRTLRQRHKRR 528
            ::....:.:..:.:.:.....|.:.||.:|||:|.||.:|:|:|.|       |...::.|..||
  Rat   442 FFEVLNYETIEQKKAYEIAGLLGDIGGQMGLFIGASILTVLELFDY-------AYEVIKHRLCRR 499

  Fly   529  528
              Rat   500  499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk28NP_573169.2 ASC 43..509 CDD:279230 116/522 (22%)
Asic1XP_006257440.1 ASC 63..541 CDD:295594 122/546 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345632
Domainoid 1 1.000 111 1.000 Domainoid score I6095
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8907
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X60
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.850

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